STRINGSTRING
cbiO1 cbiO1 cbiO2 cbiO2 cbiQ cbiQ rbsB rbsB rbsA rbsA rbsC rbsC CAJ67139.1 CAJ67139.1 CAJ67140.1 CAJ67140.1 cbiM cbiM cbiN cbiN cbiQ1 cbiQ1 cbiO cbiO CAJ67188.1 CAJ67188.1 CAJ67253.1 CAJ67253.1 spaF spaF spaE spaE spaG spaG CAJ67401.1 CAJ67401.1 CAJ67402.1 CAJ67402.1 cdd2 cdd2 cdd3 cdd3 cdd4 cdd4 CAJ67584.1 CAJ67584.1 CAJ67585.1 CAJ67585.1 CAJ67586.1 CAJ67586.1 CAJ67656.1 CAJ67656.1 CAJ67657.1 CAJ67657.1 CAJ67658.1 CAJ67658.1 oppD oppD modA modA modB modB modC modC opuCA opuCA opuCC opuCC potA potA potB potB potC potC potD potD CAJ67940.1 CAJ67940.1 CAJ67941.1 CAJ67941.1 cprA cprA cprB cprB cprC cprC ssuC ssuC ssuB ssuB ssuA ssuA metN metN metI metI metQ metQ RbsA2 RbsA2 RbsC1 RbsC1 RbsB2 RbsB2 CAJ68479.1 CAJ68479.1 CAJ68480.1 CAJ68480.1 CAJ68518.1 CAJ68518.1 CAJ68621.1 CAJ68621.1 CAJ68622.1 CAJ68622.1 CAJ68623.1 CAJ68623.1 CAJ68853.1 CAJ68853.1 CAJ69056.1 CAJ69056.1 CAJ69058.1 CAJ69058.1 CAJ69059.1 CAJ69059.1 CAJ69060.1 CAJ69060.1 CAJ69061.1 CAJ69061.1 CAJ69198.1 CAJ69198.1 CAJ69199.1 CAJ69199.1 CAJ69343.1 CAJ69343.1 CAJ69483.1 CAJ69483.1 CAJ69705.1 CAJ69705.1 CAJ69706.2 CAJ69706.2 CAJ69776.1 CAJ69776.1 CAJ69777.3 CAJ69777.3 CAJ69845.1 CAJ69845.1 bioY bioY ssuA2 ssuA2 ssuB2 ssuB2 ssuC2 ssuC2 CAJ70098.1 CAJ70098.1 CAJ70112.1 CAJ70112.1 CAJ70113.1 CAJ70113.1 pstB pstB pstA pstA pstC pstC pstS pstS CAJ70317.2 CAJ70317.2 CAJ70318.1 CAJ70318.1 CAJ70319.1 CAJ70319.1 CAJ70320.1 CAJ70320.1 CAJ70429.1 CAJ70429.1 CAJ70430.1 CAJ70430.1 CAJ70431.1 CAJ70431.1 CAJ70432.1 CAJ70432.1 CAJ70433.1 CAJ70433.1 CAJ70434.1 CAJ70434.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cbiO1ABC-type transport system, cobalt-specific ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (277 aa)
cbiO2ABC-type transport system, cobalt-specific ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (288 aa)
cbiQABC-type transport system, cobalt-specific permease; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (267 aa)
rbsBABC-type transport system, ribose-specific extracellular solute-binding protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (320 aa)
rbsAABC-type transport system, ribose-specific ATP-binding protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (503 aa)
rbsCABC-type transport system, ribose-specific permease; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
CAJ67139.1ABC-type transport system, permease. (245 aa)
CAJ67140.1ABC-type transport system,bacitracin/multidrug-family ATP-binding protein. (307 aa)
cbiMCobalamin biosynthesis protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (250 aa)
cbiNABC-type transport system, cobalt-specific extracellular solute-binding protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (94 aa)
cbiQ1ABC-type transport system, cobalt-specific permease; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: down-regulated in Spo0A mutant PMID:24568651. (232 aa)
cbiOABC-type transport system, cobalt-specific ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (273 aa)
CAJ67188.1ABC-type transport system, multidrug-family ATP-binding protein Tn916-like, CTn1-Orf11. (308 aa)
CAJ67253.1ABC-type transport system, cobalt-specific permease Tn1549-like, CTn2-Orf25. (230 aa)
spaFABC-type transport system,lantibiotic/multidrug-family ATP-binding protein. (234 aa)
spaEABC-type transport system,lantibiotic/multidrug-family permease. (256 aa)
spaGABC-type transport system,lantibiotic/multidrug-family permease. (258 aa)
CAJ67401.1Putative lipoprotein. (334 aa)
CAJ67402.1Putative lipoprotein. (370 aa)
cdd2ABC-type transport system,lantibiotic/multidrug-family permease. (245 aa)
cdd3ABC-type transport system,lantibiotic/multidrug-family permease. (253 aa)
cdd4ABC-type transport system,lantibiotic/multidrug-family ATP-binding protein. (304 aa)
CAJ67584.1ABC-type transport system, aminoacid-family extracellular solute-binding protein. (271 aa)
CAJ67585.1ABC-type transport system, aminoacid-family permease. (225 aa)
CAJ67586.1ABC-type transport system, aminoacid-family ATP-binding protein. (240 aa)
CAJ67656.1ABC-type transport system, multidrug-family ATP-binding protein. (307 aa)
CAJ67657.1ABC-type transport system, multidrug-family permease. (253 aa)
CAJ67658.1ABC-type transport system, multidrug-family permease. (260 aa)
oppDABC-type transport system, ATP-binding component; Belongs to the ABC transporter superfamily. (341 aa)
modAABC-type transport system, molybdenum-specific extracellular solute-binding protein. (270 aa)
modBABC-type transport system, molybdenum-specific permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (227 aa)
modCABC-type transport system, molybdenum-specific ATP-binding protein. (358 aa)
opuCAABC-type transport system, glycine betaine/carnitine/choline ATP-binding protein. (378 aa)
opuCCABC-type transport system, glycine betaine/carnitine/choline permease. (517 aa)
potAABC-type transport system,spermidine/putrescine ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (347 aa)
potBABC-type transport system,spermidine/putrescine permease. (278 aa)
potCABC-type transport system,spermidine/putrescine permease. (242 aa)
potDABC-type transport system,spermidine/putrescine solute-binding protein. (350 aa)
CAJ67940.1ABC-type transport system, multidrug-family permease Tn1549-like, CTn4-Orf29. (269 aa)
CAJ67941.1ABC-type transport system, multidrug-family ATP-binding protein Tn1549-like, CTn4-Orf28. (308 aa)
cprAABC-type transport system,lantibiotic/multidrug-family ATP-binding protein; PMID:20974818. (235 aa)
cprBABC-type transport system,lantibiotic/multidrug-family permease; PMID:20974818. (238 aa)
cprCABC-type transport system,lantibiotic/multidrug-family permease; PMID:20974818. (252 aa)
ssuCABC-type transport system, sulfonates-family permease. (256 aa)
ssuBABC-type transport system, sulfonates-family ATP-binding protein. (243 aa)
ssuAABC-type transport system,alkanesulfonates-family extracellular solute-binding protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: down-regulated in Spo0A mutant. Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. (330 aa)
metNABC-type transport system, methionine-specific ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (321 aa)
metIABC-type transport system, methionine-specific permease. (218 aa)
metQABC-type transport system, methionine-specific substrate-binding lipoprotein; Experimentally verified as part of mature spore proteome PMID:19542279. (263 aa)
RbsA2ABC-type transport system, sugar-family ATP-binding protein. (498 aa)
RbsC1ABC-type transport system, sugar-family permease; Belongs to the binding-protein-dependent transport system permease family. (316 aa)
RbsB2ABC-type transport system, sugar-family extracellular solute-binding protein. (320 aa)
CAJ68479.1ABC-type transport system, ATP-binding protein. (264 aa)
CAJ68480.1ABC-type transport system, permease. (686 aa)
CAJ68518.1Putative Probable D-methionine-binding lipoprotein; Belongs to the nlpA lipoprotein family. (265 aa)
CAJ68621.1ABC-type transport system, multidrug-family ATP-binding protein. (281 aa)
CAJ68622.1ABC-type transport system, multidrug-family permease. (227 aa)
CAJ68623.1ABC-type transport system, multidrug-family permease. (238 aa)
CAJ68853.1ABC-type transport system, ATP-binding protein. (245 aa)
CAJ69056.1ABC-type transport system,cystine/aminoacid-family ATP-binding protein. (249 aa)
CAJ69058.1ABC-type transport system,cystine/aminoacid-family extracellular solute-binding protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (265 aa)
CAJ69059.1ABC-type transport system,cystine/aminoacid-family permease; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (220 aa)
CAJ69060.1ABC-type transport system,cystine/aminoacid-family permease. (222 aa)
CAJ69061.1ABC-type transport system,cystine/aminoacid-family extracellular solute-binding protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (267 aa)
CAJ69198.1ABC-type transport system, molybdenum-like extracellular solute-binding protein. (270 aa)
CAJ69199.1ABC-type transport system, molybdenum-like permease. (263 aa)
CAJ69343.1ABC-type transport system, sugar-family ATP-binding protein; Belongs to the ABC transporter superfamily. (369 aa)
CAJ69483.1ABC-type transport system,pristinamycin/multidrug-family ATP-binding protein. (550 aa)
CAJ69705.1ABC-type transport system, multidrug-family ATP-binding/permease protein. (596 aa)
CAJ69706.2ABC-type transport system, multidrug-family ATP-binding/permease protein. (575 aa)
CAJ69776.1ABC-type transport system, iron-family permease. (572 aa)
CAJ69777.3ABC-type transport system,ATP-binding protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (771 aa)
CAJ69845.1ABC-type transport system, iron-family extracellular solute-binding protein. (349 aa)
bioYBiotin synthase. (181 aa)
ssuA2ABC-type transport system, sulfonate-family extracellular solute-binding protein. (319 aa)
ssuB2ABC-type transport system, sulfonate-family ATP-binding protein. (292 aa)
ssuC2ABC-type transport system, sulfonate-family permease. (260 aa)
CAJ70098.1ABC-type transport system, multidrug-family ATP-binding protein. (281 aa)
CAJ70112.1ABC-type transport system, glycine betaine/carnitine/choline ATP-binding protein. (253 aa)
CAJ70113.1ABC-type transport system, glycine betaine/carnitine/choline permease. (511 aa)
pstBABC-type transport system, phosphate-specific ATP-binding; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (254 aa)
pstAABC-type transport system, phosphate-specific permease. (274 aa)
pstCABC-type transport system, phosphate-specific permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (305 aa)
pstSABC-type transport system, phosphate extracellular solute-binding protein. (280 aa)
CAJ70317.2ABC-type transport system, sugar-family extracellular solute-binding protein. (434 aa)
CAJ70318.1ABC-type transport system, sugar-family permease. (286 aa)
CAJ70319.1ABC-type transport system, sugar-family permease. (289 aa)
CAJ70320.1ABC-type transport system, sugar-family ATP-binding protein; Belongs to the ABC transporter superfamily. (356 aa)
CAJ70429.1ABC-type transport system, iron-family extracellular solute-binding protein. (355 aa)
CAJ70430.1ABC-type transport system, iron-family permease; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (562 aa)
CAJ70431.1ABC-type transport system, iron-family ATP-binding protein; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651; Belongs to the ABC transporter superfamily. (331 aa)
CAJ70432.1ABC-type transport system, iron-family extracellular solute-binding protein. (355 aa)
CAJ70433.1ABC-type transport system, iron-family permease. (562 aa)
CAJ70434.1ABC-type transport system, iron-family ATP-binding protein; Belongs to the ABC transporter superfamily. (331 aa)
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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