STRINGSTRING
GDI0700 GDI0700 GDI0714 GDI0714 GDI0715 GDI0715 GDI0869 GDI0869 GDI0911 GDI0911 GDI0917 GDI0917 GDI1291 GDI1291 GDI1728 GDI1728 GDI1838 GDI1838 cobT-2 cobT-2 cobS-2 cobS-2 marC marC GDI2045 GDI2045 lysS lysS GDI2067 GDI2067 GDI2298 GDI2298 GDI3176 GDI3176 GDI3220 GDI3220 GDI3246 GDI3246 GDI3362 GDI3362
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GDI0700Putative GcrA cell cycle regulator. (232 aa)
GDI0714Conserved hypothetical protein. (1014 aa)
GDI0715Putative UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1184 aa)
GDI0869Conserved hypothetical protein. (181 aa)
GDI0911Putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1. (122 aa)
GDI0917Putative membrane protein. (184 aa)
GDI1291Conserved hypothetical protein. (300 aa)
GDI1728Conserved protein. (192 aa)
GDI1838Thioredoxin protein. (205 aa)
cobT-2Putative cobalamin biosynthesis protein cobT. (633 aa)
cobS-2Cobalt chelatase, pCobS small subunit; Putative aerobic cobaltochelatase cobS subunit (EC 6.6.1.2) (Hydrogenobyrini acid a,c-diamide cobaltochelatase cobS subunit. (333 aa)
marCPutative multiple antibiotic resistance protein marC. (243 aa)
GDI2045Putative membrane protein. (692 aa)
lysSPutative Lysyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (540 aa)
GDI2067Putative transporter protein. (228 aa)
GDI2298Putative oxidoreductase. (269 aa)
GDI3176Conserved hypothetical protein; Belongs to the UPF0335 family. (90 aa)
GDI3220Putative oxidoreductase. (101 aa)
GDI3246Conserved hypothetical protein. (494 aa)
GDI3362Putative DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. (370 aa)
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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