STRINGSTRING
GDI0214 GDI0214 GDI0322 GDI0322 GDI0350 GDI0350 GDI0351 GDI0351 GDI0352 GDI0352 GDI0353 GDI0353 GDI0354 GDI0354 GDI0355 GDI0355 GDI0357 GDI0357 rbsC rbsC GDI0359 GDI0359 GDI0360 GDI0360 iolC iolC iolD iolD iolE iolE IolB IolB idhA idhA GDI0527 GDI0527 mtnB mtnB mtnD mtnD mtnC mtnC GDI0608 GDI0608 GDI0609 GDI0609 GDI0611 GDI0611 aroD aroD aldA-3 aldA-3 GDI0641 GDI0641 GDI0642 GDI0642 galP galP GDI0657 GDI0657 GDI0658 GDI0658 GDI1006 GDI1006 GDI1196 GDI1196 GDI1197 GDI1197 GDI1198 GDI1198 GDI1199 GDI1199 GDI1200 GDI1200 GDI1201 GDI1201 idnD idnD GDI1352 GDI1352 GDI1481 GDI1481 GDI1482 GDI1482 GDI1483 GDI1483 wrbA wrbA GDI1485 GDI1485 rbsB rbsB GDI1487 GDI1487 arsR arsR GDI1489 GDI1489 GDI1490 GDI1490 GDI1491 GDI1491 rbsC-2 rbsC-2 rbsC-3 rbsC-3 rbsA rbsA GDI1495 GDI1495 GDI1496 GDI1496 GDI1527 GDI1527 GDI1851 GDI1851 GDI1905 GDI1905 GDI1906 GDI1906 pgl-2 pgl-2 deoD deoD mtnA mtnA spe spe spe-2 spe-2 rbsA-2 rbsA-2 rbsC-4 rbsC-4 rbsB-2 rbsB-2 GDI2444 GDI2444 GDI2445 GDI2445 GDI2447 GDI2447 GDI2481 GDI2481 GDI2482 GDI2482 xylH xylH xylG xylG xylF xylF rbsB-3 rbsB-3 rbsC-5 rbsC-5 rbsA-3 rbsA-3 GDI2629 GDI2629 rbsC-6 rbsC-6 GDI2632 GDI2632 rbsC-7 rbsC-7 rbsB-4 rbsB-4 rbsC-8 rbsC-8 rbsA-4 rbsA-4 GDI2688 GDI2688 GDI2689 GDI2689 GDI2690 GDI2690 GDI2691 GDI2691 GDI2692 GDI2692 GDI2693 GDI2693 GDI2694 GDI2694 rbsK rbsK GDI2697 GDI2697 gabD-4 gabD-4 ate ate GDI3120 GDI3120 GDI3121 GDI3121 mtnK mtnK GDI3128 GDI3128 GDI3180 GDI3180 GDI3203 GDI3203 GDI3204 GDI3204 GDI3205 GDI3205 GDI3206 GDI3206 GDI3207 GDI3207 GDI3209 GDI3209 GDI3210 GDI3210 GDI3211 GDI3211 GDI3212 GDI3212 GDI3213 GDI3213 GDI3717 GDI3717 GDI3726 GDI3726 GDI3727 GDI3727 GDI3728 GDI3728 GDI3729 GDI3729 GDI3730 GDI3730 GDI3731 GDI3731 GDI3732 GDI3732 GDI3733 GDI3733 GDI3830 GDI3830
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GDI0214Putative NAD(P)H dehydrogenase (quinone). (263 aa)
GDI0322Conserved hypothetical protein. (370 aa)
GDI0350Putative transcriptional regulator protein, family lacI. (366 aa)
GDI0351Conserved hypothetical protein. (398 aa)
GDI0352Putative short-chain dehydrogenase/reductase. (278 aa)
GDI0353Putative oxidoreductase protein. (380 aa)
GDI0354Putative periplasmic binding proteins. (314 aa)
GDI0355Putative ABC transporter ATP-binding protein. (236 aa)
GDI0357Hypothetical protein. (39 aa)
rbsCPutative ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (391 aa)
GDI0359Putative sugar isomerase. (285 aa)
GDI0360Hypothetical protein. (53 aa)
iolCPutative myo-inositol catabolism, sugar kinase protein. (642 aa)
iolDPutative acetolactate synthase large subunit. (622 aa)
iolEPutative Sugar phosphate isomerases/epimerases. (300 aa)
IolBPutative myo-inositol catabolism protein. (266 aa)
idhAPutative inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose). (337 aa)
GDI0527Aminotransferase. (390 aa)
mtnBMethylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily. (225 aa)
mtnD1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. (179 aa)
mtnCEnolase-phosphatase; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family. (237 aa)
GDI0608Putative galactose-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (452 aa)
GDI0609Hypothetical protein. (52 aa)
GDI0611Putative xylose isomerase. (266 aa)
aroDPutative 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. (268 aa)
aldA-3Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (511 aa)
GDI0641Putative transcriptional regulatory protein, Fis family. (338 aa)
GDI0642Hypothetical protein. (131 aa)
galPPutative galactose-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (467 aa)
GDI0657Putative tautomerase protein; Belongs to the 4-oxalocrotonate tautomerase family. (76 aa)
GDI0658Conserved hypothetical protein. (629 aa)
GDI1006Putative NAD(P)H oxidoreductase. (263 aa)
GDI1196Conserved hypothetical protein. (170 aa)
GDI1197D-2-hydroxyacid dehydrogensase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (308 aa)
GDI1198Putative 2-keto-4-pentenoate hydratase-like. (228 aa)
GDI1199Putative sugar transport protein. (433 aa)
GDI1200Oxidoreductase protein. (334 aa)
GDI1201Conserved protein; Belongs to the UPF0303 family. (178 aa)
idnDL-idonate 5-dehydrogenase. (399 aa)
GDI1352Putative ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (441 aa)
GDI1481Conserved hypothetical protein; Belongs to the UPF0312 family. (188 aa)
GDI1482Putative Cytochrome b561. (203 aa)
GDI1483Conserved hypothetical protein; Belongs to the UPF0312 family. (205 aa)
wrbAFlavoprotein. (199 aa)
GDI1485Putative antibiotic biosynthesis monooxygenase. (103 aa)
rbsBD-ribose-binding protein. (330 aa)
GDI1487Putative carbohydrate kinase. (473 aa)
arsRPutative transcriptional regulator arsR. (274 aa)
GDI1489Conserved hypothetical protein. (396 aa)
GDI1490Putative carbohydrate kinase protein. (424 aa)
GDI1491Putative haloacid dehalogenase-like hydrolase. (279 aa)
rbsC-2Ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (325 aa)
rbsC-3Ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (343 aa)
rbsARibose transport ATP-binding protein rbsA. (516 aa)
GDI1495Ribose ABC transporter, substrate-binding protein. (368 aa)
GDI1496Putative membrane protein. (171 aa)
GDI1527Putative permease protein. (206 aa)
GDI1851Conserved hypothetical protein. (291 aa)
GDI1905Conserved hypothetical protein. (168 aa)
GDI1906Conserved hypothetical protein. (182 aa)
pgl-2Putative 6-phosphogluconolactonase. (414 aa)
deoD5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. (292 aa)
mtnATranslation initiation factor; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). (365 aa)
speSpermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. (289 aa)
spe-2Putaive S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (153 aa)
rbsA-2Putative ribose transport ATP-binding protein rbsA. (513 aa)
rbsC-4Putative ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
rbsB-2Putative D-ribose-binding protein precursor. (335 aa)
GDI2444Hypothetical protein. (148 aa)
GDI2445Putative dienelactone hydrolases. (279 aa)
GDI2447Putative transcriptional regulator. (475 aa)
GDI2481Hypothetical protein. (65 aa)
GDI2482Putative zinc-containing alcohol dehydrogenase superfamily. (325 aa)
xylHPutative xylose transport system permease protein xylH; Belongs to the binding-protein-dependent transport system permease family. (407 aa)
xylGD-xylose transport ATP-binding protein xylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (522 aa)
xylFD-xylose-binding periplasmic protein precursor. (350 aa)
rbsB-3Putative D-ribose-binding protein precursor. (316 aa)
rbsC-5Putative ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (339 aa)
rbsA-3Putative ribose transport ATP-binding protein rbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (524 aa)
GDI2629Conserved hypothetical protein. (354 aa)
rbsC-6Putative ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (320 aa)
GDI2632Putative ABC transporter, ATP-binding protein. (261 aa)
rbsC-7Ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (106 aa)
rbsB-4D-ribose-binding periplasmic protein precursor. (336 aa)
rbsC-8Putative ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (307 aa)
rbsA-4Putative ribose transport ATP-binding protein rbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (514 aa)
GDI2688Conserved hypothetical protein. (254 aa)
GDI2689Putative transcriptional regulator, GntR family. (291 aa)
GDI2690Putative membrane lipoprotein. (330 aa)
GDI2691Putative ABC transporter, ATP-binding protein. (490 aa)
GDI2692Putative amino acid transporter; Belongs to the binding-protein-dependent transport system permease family. (344 aa)
GDI2693Putative amino acid transporter; Belongs to the binding-protein-dependent transport system permease family. (295 aa)
GDI2694Putative isochorismatase family protein rutB. (187 aa)
rbsKPutative ribokinase. (292 aa)
GDI2697Conserved hypothetical protein. (255 aa)
gabD-4Putative succinate-semialdehyde dehydrogenase [NADP+]. (496 aa)
atePutative arginyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. (260 aa)
GDI3120Hypothetical protein. (52 aa)
GDI3121Putative sugar transporter. (451 aa)
mtnKPutative kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate. (437 aa)
GDI3128Putative endonuclease protein. (186 aa)
GDI3180Putative lipase protein. (303 aa)
GDI3203Putative steroid protein related. (307 aa)
GDI3204Conserved hypothetical protein. (129 aa)
GDI3205Putative transcriptional regulator. (180 aa)
GDI3206Conserved hypothetical protein. (207 aa)
GDI3207Putative oxidoreductase protein. (223 aa)
GDI3209Putative lipoprotein. (380 aa)
GDI3210Putative ABC transporter. (511 aa)
GDI3211Putative amino acid transporter; Belongs to the binding-protein-dependent transport system permease family. (361 aa)
GDI3212Putative amino acid transporter; Belongs to the binding-protein-dependent transport system permease family. (312 aa)
GDI3213Conserved hypothetical protein. (280 aa)
GDI3717Conserved hypothetical protein. (124 aa)
GDI3726Putative transport ATP-binding protein. (522 aa)
GDI3727Putative integrase. (330 aa)
GDI3728Putative transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (262 aa)
GDI3729Putative transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (334 aa)
GDI3730Putative exported protein. (335 aa)
GDI3731Putative antibiotic biosynthesis monooxygenase. (103 aa)
GDI3732Putative oxidoreductase. (331 aa)
GDI3733Hypothetical protein. (193 aa)
GDI3830Putative aldolase protein. (246 aa)
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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