STRINGSTRING
GDI0322 GDI0322 GDI0350 GDI0350 GDI0351 GDI0351 GDI0352 GDI0352 GDI0353 GDI0353 GDI0354 GDI0354 GDI0355 GDI0355 GDI0357 GDI0357 rbsC rbsC GDI0359 GDI0359 GDI0360 GDI0360 iolC iolC iolD iolD iolE iolE IolB IolB idhA idhA rbsB rbsB rbsC-2 rbsC-2 rbsC-3 rbsC-3 rbsA rbsA GDI1495 GDI1495 GDI1527 GDI1527 rbsA-2 rbsA-2 rbsC-4 rbsC-4 rbsB-2 rbsB-2 xylH xylH xylG xylG xylF xylF rbsB-3 rbsB-3 rbsC-5 rbsC-5 rbsA-3 rbsA-3 GDI2629 GDI2629 rbsC-6 rbsC-6 GDI2632 GDI2632 rbsC-7 rbsC-7 rbsB-4 rbsB-4 rbsC-8 rbsC-8 rbsA-4 rbsA-4 GDI2688 GDI2688 GDI2689 GDI2689 GDI2690 GDI2690 GDI2691 GDI2691 GDI2692 GDI2692 GDI2693 GDI2693 GDI2694 GDI2694 rbsK rbsK GDI2697 GDI2697 gabD-4 gabD-4 GDI3203 GDI3203 GDI3204 GDI3204 GDI3205 GDI3205 GDI3206 GDI3206 GDI3207 GDI3207 GDI3209 GDI3209 GDI3210 GDI3210 GDI3211 GDI3211 GDI3212 GDI3212 GDI3213 GDI3213 GDI3726 GDI3726 GDI3727 GDI3727 GDI3728 GDI3728 GDI3729 GDI3729 GDI3730 GDI3730 GDI3731 GDI3731 GDI3732 GDI3732 GDI3733 GDI3733
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GDI0322Conserved hypothetical protein. (370 aa)
GDI0350Putative transcriptional regulator protein, family lacI. (366 aa)
GDI0351Conserved hypothetical protein. (398 aa)
GDI0352Putative short-chain dehydrogenase/reductase. (278 aa)
GDI0353Putative oxidoreductase protein. (380 aa)
GDI0354Putative periplasmic binding proteins. (314 aa)
GDI0355Putative ABC transporter ATP-binding protein. (236 aa)
GDI0357Hypothetical protein. (39 aa)
rbsCPutative ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (391 aa)
GDI0359Putative sugar isomerase. (285 aa)
GDI0360Hypothetical protein. (53 aa)
iolCPutative myo-inositol catabolism, sugar kinase protein. (642 aa)
iolDPutative acetolactate synthase large subunit. (622 aa)
iolEPutative Sugar phosphate isomerases/epimerases. (300 aa)
IolBPutative myo-inositol catabolism protein. (266 aa)
idhAPutative inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose). (337 aa)
rbsBD-ribose-binding protein. (330 aa)
rbsC-2Ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (325 aa)
rbsC-3Ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (343 aa)
rbsARibose transport ATP-binding protein rbsA. (516 aa)
GDI1495Ribose ABC transporter, substrate-binding protein. (368 aa)
GDI1527Putative permease protein. (206 aa)
rbsA-2Putative ribose transport ATP-binding protein rbsA. (513 aa)
rbsC-4Putative ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
rbsB-2Putative D-ribose-binding protein precursor. (335 aa)
xylHPutative xylose transport system permease protein xylH; Belongs to the binding-protein-dependent transport system permease family. (407 aa)
xylGD-xylose transport ATP-binding protein xylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (522 aa)
xylFD-xylose-binding periplasmic protein precursor. (350 aa)
rbsB-3Putative D-ribose-binding protein precursor. (316 aa)
rbsC-5Putative ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (339 aa)
rbsA-3Putative ribose transport ATP-binding protein rbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (524 aa)
GDI2629Conserved hypothetical protein. (354 aa)
rbsC-6Putative ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (320 aa)
GDI2632Putative ABC transporter, ATP-binding protein. (261 aa)
rbsC-7Ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (106 aa)
rbsB-4D-ribose-binding periplasmic protein precursor. (336 aa)
rbsC-8Putative ribose transport system permease protein rbsC; Belongs to the binding-protein-dependent transport system permease family. (307 aa)
rbsA-4Putative ribose transport ATP-binding protein rbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (514 aa)
GDI2688Conserved hypothetical protein. (254 aa)
GDI2689Putative transcriptional regulator, GntR family. (291 aa)
GDI2690Putative membrane lipoprotein. (330 aa)
GDI2691Putative ABC transporter, ATP-binding protein. (490 aa)
GDI2692Putative amino acid transporter; Belongs to the binding-protein-dependent transport system permease family. (344 aa)
GDI2693Putative amino acid transporter; Belongs to the binding-protein-dependent transport system permease family. (295 aa)
GDI2694Putative isochorismatase family protein rutB. (187 aa)
rbsKPutative ribokinase. (292 aa)
GDI2697Conserved hypothetical protein. (255 aa)
gabD-4Putative succinate-semialdehyde dehydrogenase [NADP+]. (496 aa)
GDI3203Putative steroid protein related. (307 aa)
GDI3204Conserved hypothetical protein. (129 aa)
GDI3205Putative transcriptional regulator. (180 aa)
GDI3206Conserved hypothetical protein. (207 aa)
GDI3207Putative oxidoreductase protein. (223 aa)
GDI3209Putative lipoprotein. (380 aa)
GDI3210Putative ABC transporter. (511 aa)
GDI3211Putative amino acid transporter; Belongs to the binding-protein-dependent transport system permease family. (361 aa)
GDI3212Putative amino acid transporter; Belongs to the binding-protein-dependent transport system permease family. (312 aa)
GDI3213Conserved hypothetical protein. (280 aa)
GDI3726Putative transport ATP-binding protein. (522 aa)
GDI3727Putative integrase. (330 aa)
GDI3728Putative transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (262 aa)
GDI3729Putative transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (334 aa)
GDI3730Putative exported protein. (335 aa)
GDI3731Putative antibiotic biosynthesis monooxygenase. (103 aa)
GDI3732Putative oxidoreductase. (331 aa)
GDI3733Hypothetical protein. (193 aa)
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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