82 items (Gluconacetobacter diazotrophicus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GDI0091	Putative membrane protein. (170 aa)
	GDI0095	Conserved hypothetical protein. (94 aa)
	GDI0096	Conserved hypothetical protein. (92 aa)
	GDI0105	Putative transcriptor regulator. (97 aa)
	GDI0106	Putative replication protein. (354 aa)
	GDI0107	Putative cobyrinic acid a,c-diamide synthase. (210 aa)
	GDI0108	Putative DNA methylase N-4/N-6. (247 aa)
	GDI0109	Conserved hypothetical protein. (154 aa)
	traF	Putative conjugal transfer protein traF. (180 aa)
	GDI0111	Conserved hypothetical protein. (112 aa)
	slt	Putative soluble lytic murein transglycosylase precursor. (233 aa)
	GDI0117	Conserved hypothetical protein. (432 aa)
	traG	Putative conjugal transfer protein TRAG. (689 aa)
	GDI0129	Conserved hypothetical protein. (143 aa)
	trbB	Putative type IV secretion system protein. (334 aa)
	trbC	Putative conjugal transfer protein trbC. (122 aa)
	trbD	Putative conjugal transfer protein trbD. (91 aa)
	trbE	Putative conjugal transfer protein trbE. (813 aa)
	trbJ	Putative type IV secretion system protein. (245 aa)
	trbL	Putative type IV secretion system protein. (473 aa)
	trbF	Putative type IV secretion system protein. (227 aa)
	trbG	Putative type IV secretion system protein. (333 aa)
	trbI	Putative type IV secretion system protein. (391 aa)
	GDI0396	Conserved hypothetical protein. (98 aa)
	GDI0397	Putative replication protein A. (357 aa)
	GDI0398	Conserved hypothetical protein. (162 aa)
	traF-2	Putative conjugal transfer protein TraF. (209 aa)
	GDI0400	Conserved hypothetical protein. (113 aa)
	GDI0403	Conserved hypothetical protein. (579 aa)
	GDI1010	Conserved hypothetical protein. (81 aa)
	trbI-2	Putative conjugation TrbI-like protein. (386 aa)
	trbG-2	Putative conjugal transfer protein trbG. (328 aa)
	trbF-2	Putative conjugal transfer protein; TrbF. (226 aa)
	trbL-2	Putative conjugal transfer protein; TrbL. (419 aa)
	trbJ-2	Putative conjugal transfer protein; TrbJ. (248 aa)
	trbE-2	Putative conjugal transfer protein trbE. (808 aa)
	trbD-2	Putative conjugal transfer protein; TrbD. (88 aa)
	trbC-2	Conjugal transfer protein TrbC. (105 aa)
	trbB-2	Putative type II/IV secretion system protein trbB. (322 aa)
	GDI1022	Conserved hypothetical protein. (141 aa)
	traG-2	Putative conjugal transfer protein traG. (660 aa)
	GDI1027	Conserved hypothetical protein. (584 aa)
	trbG-3	Putative conjugal transfer protein (fragment). (328 aa)
	trbI-3	Putative conjugal transfer protein trbI/VirB10. (386 aa)
	GDI1104	Conserved hypothetical protein. (81 aa)
	GDI1543	Conserved hypothetical protein. (160 aa)
	GDI1548	Conserved hypothetical protein. (703 aa)
	GDI1549	Putative regulator protein. (143 aa)
	GDI2735	Putative transposase. (77 aa)
	trbI-4	Putative conjugation TrbI-like protein. (390 aa)
	GDI2737	Putative type IV secretion system. (333 aa)
	trbF-3	Putative conjugal transfer protein trbF. (228 aa)
	trbJ-3	Conjugal transfer protein; TrbL. (244 aa)
	trbE-3	Putative conjugal transfer protein; TrbE. (810 aa)
	trbD-3	Putative conjugal transfer protein trbD. (92 aa)
	trbC-3	Putative conjugal transfer protein trbC. (110 aa)
	GDI2745	Putative type II/IV secretion system protein. (309 aa)
	GDI2748	Conserved hypothetical protein. (143 aa)
	traG-3	Putative conjugal transfer protein traG. (666 aa)
	GDI2753	Conserved hypothetical protein. (579 aa)
	GDI2795	Conserved hypothetical protein. (113 aa)
	GDI2796	Putative conjugal transfer protein precursor. (193 aa)
	GDI2797	Conserved hypothetical protein. (151 aa)
	GDI2798	Putative replication protein A. (356 aa)
	GDI2799	Conserved hypothetical protein. (98 aa)
	GDI2862	Conserved hypothetical protein. (577 aa)
	GDI2865	Conserved hypothetical protein. (113 aa)
	traF-3	Putative conjugal transfer protein traF. (209 aa)
	GDI2867	Conserved hypothetical protein. (158 aa)
	GDI2877	Conserved hypothetical protein. (108 aa)
	GDI2905	Conserved hypothetical protein. (87 aa)
	trbI-5	Putative conjugal transfer protein trbI. (378 aa)
	CagX	Putative conjugal transfer protein. (335 aa)
	trbF-4	Putative conjugal transfer protein trbF. (230 aa)
	trbL-3	Putative TrbL/VirB6 conjugal transfer protein. (488 aa)
	trbJ-4	Putative conjugal transfer protein trbJ. (236 aa)
	trbE-4	Putative conjugal transfer protein trbE. (811 aa)
	trbD-4	Putative conjugal transfer protein trbD. (91 aa)
	trbC-4	Putative conjugal transfer protein trbC. (118 aa)
	trbB-3	Putative conjugal transfer protein trbB. (351 aa)
	GDI2916	Conserved hypothetical protein. (149 aa)
	traG-4	Putative conjugal transfer protein traG. (673 aa)

Your Current Organism:

Gluconacetobacter diazotrophicus

NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CagX	GDI1010	GDI2907	GDI1010	Putative conjugal transfer protein.	Conserved hypothetical protein.	0.517
CagX	GDI1104	GDI2907	GDI1104	Putative conjugal transfer protein.	Conserved hypothetical protein.	0.686
CagX	GDI1548	GDI2907	GDI1548	Putative conjugal transfer protein.	Conserved hypothetical protein.	0.637
CagX	GDI2735	GDI2907	GDI2735	Putative conjugal transfer protein.	Putative transposase.	0.518
CagX	GDI2745	GDI2907	GDI2745	Putative conjugal transfer protein.	Putative type II/IV secretion system protein.	0.529
CagX	GDI2796	GDI2907	GDI2796	Putative conjugal transfer protein.	Putative conjugal transfer protein precursor.	0.403
CagX	GDI2905	GDI2907	GDI2905	Putative conjugal transfer protein.	Conserved hypothetical protein.	0.688
CagX	traF	GDI2907	GDI0110	Putative conjugal transfer protein.	Putative conjugal transfer protein traF.	0.495
CagX	traG	GDI2907	GDI0128	Putative conjugal transfer protein.	Putative conjugal transfer protein TRAG.	0.718
CagX	traG-2	GDI2907	GDI1023	Putative conjugal transfer protein.	Putative conjugal transfer protein traG.	0.712
CagX	traG-3	GDI2907	GDI2749	Putative conjugal transfer protein.	Putative conjugal transfer protein traG.	0.718
CagX	traG-4	GDI2907	GDI2917	Putative conjugal transfer protein.	Putative conjugal transfer protein traG.	0.711
CagX	trbB	GDI2907	GDI0130	Putative conjugal transfer protein.	Putative type IV secretion system protein.	0.550
CagX	trbB-2	GDI2907	GDI1019	Putative conjugal transfer protein.	Putative type II/IV secretion system protein trbB.	0.556
CagX	trbB-3	GDI2907	GDI2914	Putative conjugal transfer protein.	Putative conjugal transfer protein trbB.	0.780
CagX	trbC	GDI2907	GDI0131	Putative conjugal transfer protein.	Putative conjugal transfer protein trbC.	0.835
CagX	trbC-2	GDI2907	GDI1018	Putative conjugal transfer protein.	Conjugal transfer protein TrbC.	0.835
CagX	trbC-3	GDI2907	GDI2744	Putative conjugal transfer protein.	Putative conjugal transfer protein trbC.	0.838
CagX	trbC-4	GDI2907	GDI2913	Putative conjugal transfer protein.	Putative conjugal transfer protein trbC.	0.919
CagX	trbD	GDI2907	GDI0132	Putative conjugal transfer protein.	Putative conjugal transfer protein trbD.	0.825

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