Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AraC | GntR | GDI1167 | GDI0682 | Putative transcriptional regulator protein, AraC family. | Putative transcriptional regulator, GntR family. | 0.617 |
| AraC | rpoD-2 | GDI1167 | GDI3335 | Putative transcriptional regulator protein, AraC family. | RNA polymerase sigma factor rpoD (Sigma-A); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.541 |
| AraC-2 | GntR | GDI1376 | GDI0682 | Putative AraC-family transcriptional regulator. | Putative transcriptional regulator, GntR family. | 0.684 |
| AraC-2 | rpoD-2 | GDI1376 | GDI3335 | Putative AraC-family transcriptional regulator. | RNA polymerase sigma factor rpoD (Sigma-A); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.541 |
| ArsR-2 | fur | GDI3648 | GDI1398 | Putative transcriptional regulator, ArsR family. | Putative ferric uptake regulation protein; Belongs to the Fur family. | 0.425 |
| GDI0084 | GDI0199 | GDI0084 | GDI0199 | Putative transcriptional regulator, MerR family. | Conserved hypothetical protein. | 0.433 |
| GDI0084 | rpoD-2 | GDI0084 | GDI3335 | Putative transcriptional regulator, MerR family. | RNA polymerase sigma factor rpoD (Sigma-A); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.965 |
| GDI0084 | rpoH | GDI0084 | GDI2254 | Putative transcriptional regulator, MerR family. | Putative RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.812 |
| GDI0199 | GDI0084 | GDI0199 | GDI0084 | Conserved hypothetical protein. | Putative transcriptional regulator, MerR family. | 0.433 |
| GDI0208 | GDI0258 | GDI0208 | GDI0258 | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Putative transcriptional regulator, LysR family. | 0.542 |
| GDI0208 | GDI1005 | GDI0208 | GDI1005 | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.695 |
| GDI0208 | GDI1007 | GDI0208 | GDI1007 | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.772 |
| GDI0208 | GDI1105 | GDI0208 | GDI1105 | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Putative HTH-type transcriptional regulator benM (Ben and cat opero transcriptional regulator); Belongs to the LysR transcriptional regulatory family. | 0.757 |
| GDI0208 | GDI2000 | GDI0208 | GDI2000 | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.772 |
| GDI0208 | GDI2671 | GDI0208 | GDI2671 | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.613 |
| GDI0208 | GDI2776 | GDI0208 | GDI2776 | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Putative transcriptional Regulator, LysR family. | 0.581 |
| GDI0208 | LysR-15 | GDI0208 | GDI2734 | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.761 |
| GDI0208 | LysR-16 | GDI0208 | GDI2844 | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.720 |
| GDI0208 | LysR-18 | GDI0208 | GDI3156 | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator LysR; Belongs to the LysR transcriptional regulatory family. | 0.753 |
| GDI0208 | LysR-2 | GDI0208 | GDI0139 | Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Putative transcriptional regulator, LysR family. | 0.440 |
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