Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GDI0197 | GDI0198 | GDI0197 | GDI0198 | Putative 5-oxoprolinase (ATP-hydrolysing). | Putative 5-oxoprolinase (ATP-hydrolysing). | 0.999 |
| GDI0197 | GDI3632 | GDI0197 | GDI3632 | Putative 5-oxoprolinase (ATP-hydrolysing). | Putative amidohydrolase. | 0.874 |
| GDI0197 | putA | GDI0197 | GDI2670 | Putative 5-oxoprolinase (ATP-hydrolysing). | Putative bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.881 |
| GDI0198 | GDI0197 | GDI0198 | GDI0197 | Putative 5-oxoprolinase (ATP-hydrolysing). | Putative 5-oxoprolinase (ATP-hydrolysing). | 0.999 |
| GDI0198 | GDI3632 | GDI0198 | GDI3632 | Putative 5-oxoprolinase (ATP-hydrolysing). | Putative amidohydrolase. | 0.875 |
| GDI0198 | putA | GDI0198 | GDI2670 | Putative 5-oxoprolinase (ATP-hydrolysing). | Putative bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.887 |
| GDI0460 | ooxA | GDI0460 | GDI2713 | Putative oxidoreductase. | Putative opine oxidase subunit A. | 0.922 |
| GDI0460 | puuD | GDI0460 | GDI1301 | Putative oxidoreductase. | Putative Gamma-glutamyl-gamma-aminobutyrate hydrolase. | 0.549 |
| GDI0607 | GDI1352 | GDI0607 | GDI1352 | Putative aspartate aminotransferase. | Putative ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.466 |
| GDI0607 | GDI3125 | GDI0607 | GDI3125 | Putative aspartate aminotransferase. | Putative aspartate aminotransferase. | 0.767 |
| GDI0607 | putA | GDI0607 | GDI2670 | Putative aspartate aminotransferase. | Putative bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.785 |
| GDI0816 | putA | GDI0816 | GDI2670 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Putative bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.882 |
| GDI0940 | proA | GDI0940 | GDI0939 | Hypothetical protein. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.992 |
| GDI0940 | proB | GDI0940 | GDI3174 | Hypothetical protein. | Putative glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.993 |
| GDI0940 | proC | GDI0940 | GDI0925 | Hypothetical protein. | Putative pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.608 |
| GDI0940 | putA | GDI0940 | GDI2670 | Hypothetical protein. | Putative bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.890 |
| GDI1352 | GDI0607 | GDI1352 | GDI0607 | Putative ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Putative aspartate aminotransferase. | 0.466 |
| GDI1352 | GDI2456 | GDI1352 | GDI2456 | Putative ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Putative L-amino-acid oxidase precursor. | 0.500 |
| GDI1352 | spe | GDI1352 | GDI2319 | Putative ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. | 0.899 |
| GDI1352 | spe-2 | GDI1352 | GDI2320 | Putative ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Putaive S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. | 0.568 |
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