STRINGSTRING
GDI1110 GDI1110 GDI1733 GDI1733 pcm pcm GDI1887 GDI1887 GDI1902 GDI1902 bioF bioF GDI1921 GDI1921 bioD bioD fabZ fabZ klb klb GDI2672 GDI2672 GDI2730 GDI2730 kbl kbl fabF fabF fabG-3 fabG-3 bioB bioB fabG-4 fabG-4 fabZ-2 fabZ-2 birA birA GDI3180 GDI3180 fabI fabI GDI3583 GDI3583 GDI3734 GDI3734 GDI3744 GDI3744
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GDI11103-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (432 aa)
GDI1733Acetoin(diacetyl) reductase. (243 aa)
pcmProtein-L-isoaspartate O-methyltransferase. (238 aa)
GDI18873-oxoacyl-[acyl-carrier-protein] reductase. (264 aa)
GDI1902Methyltransferase. (289 aa)
bioFPutative 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. (407 aa)
GDI1921Conserved hypothetical protein. (211 aa)
bioDPutative biotin synthesis protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (474 aa)
fabZ(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (161 aa)
klbPutative 2-amino-3-ketobutyrate coenzyme A ligase. (428 aa)
GDI2672Putative oxidoreductase protein. (246 aa)
GDI2730Putative oxidoreductase protein. (275 aa)
kbl2-amino-3-ketobutyrate coenzyme A ligase. (400 aa)
fabF3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (435 aa)
fabG-33-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (249 aa)
bioBPutative biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (366 aa)
fabG-43-oxoacyl-[acyl-carrier-protein] reductase. (243 aa)
fabZ-2Putative (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase. (159 aa)
birAPutative biotin--[acetyl-CoA-carboxylase] synthetase. (260 aa)
GDI3180Putative lipase protein. (303 aa)
fabIEnoyl-[acyl-carrier-protein] reductase [NADH]. (346 aa)
GDI3583Conserved hypothetical protein. (339 aa)
GDI3734Putative short-chain dehydrogenases/reductases family. (262 aa)
GDI3744Conserved hypothetical protein. (371 aa)
Your Current Organism:
Gluconacetobacter diazotrophicus
NCBI taxonomy Id: 272568
Other names: G. diazotrophicus PA1 5, Gluconacetobacter diazotrophicus ATCC 49037, Gluconacetobacter diazotrophicus BR 11281, Gluconacetobacter diazotrophicus CCUG 37298, Gluconacetobacter diazotrophicus CIP 103539, Gluconacetobacter diazotrophicus DSM 5601, Gluconacetobacter diazotrophicus LMG 7603, Gluconacetobacter diazotrophicus NCCB 89154, Gluconacetobacter diazotrophicus PA1 5, Gluconacetobacter diazotrophicus str. PA1 5, Gluconacetobacter diazotrophicus strain PA1 5
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