STRINGSTRING
rps17E rps17E rps9P rps9P rps2P rps2P rpl24E rpl24E rpl21E rpl21E rps10p-2 rps10p-2 rps3AE rps3AE rps5P rps5P rpl19E rpl19E rpl32E rpl32E rps17P rps17P rpl29P rpl29P rps19P rps19P rpl37AE rpl37AE rpl15E rpl15E rps6E rps6E rps10p-1 rps10p-1 rps24E rps24E rpl31E rpl31E rps19E rps19E rpl44E rpl44E
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps17E30S ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family. (63 aa)
rps9P30S ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. (132 aa)
rps2P30S ribosomal protein S2P. (267 aa)
rpl24E50S ribosomal protein L24e; Binds to the 23S rRNA. (116 aa)
rpl21E50S ribosomal protein L21e; This is one of 5 proteins that mediate the attachment of the 5S rRNA onto the large ribosomal subunit, stabilizing the orientation of adjacent RNA domains. (96 aa)
rps10p-2Ribosomal protein S10p; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (138 aa)
rps3AE30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. (213 aa)
rps5P30S ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. (212 aa)
rpl19E50S ribosomal protein L19e; Binds to the 23S rRNA. Located at the polypeptide exit tunnel on the outside of the subunit; Belongs to the eukaryotic ribosomal protein eL19 family. (149 aa)
rpl32E50S ribosomal protein L32E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL32 family. (241 aa)
rps17PRibosomal protein S17p; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (112 aa)
rpl29P50S ribosomal protein L29P; Stabilizes the tertiary rRNA structure within the 23S rRNA domain (domain I) to which it binds. Located at the polypeptide exit tunnel on the outside of the subunit; Belongs to the universal ribosomal protein uL29 family. (71 aa)
rps19P30S ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (140 aa)
rpl37AE50S ribosomal protein L37ae; Binds to the 23S rRNA. (116 aa)
rpl15E50S ribosomal protein L15e. (196 aa)
rps6E30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. (129 aa)
rps10p-130S ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa)
rps24E30S ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family. (102 aa)
rpl31E50S ribosomal protein L31e; Binds to the 23S rRNA. Located at the polypeptide exit tunnel on the outside of the subunit; Belongs to the eukaryotic ribosomal protein eL31 family. (92 aa)
rps19E30S ribosomal protein S19E; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (153 aa)
rpl44E50S ribosomal protein L44E; Binds to the 23S rRNA. Binds deacetylated tRNA in the E site; when the tRNA binds a stretch of 7 amino acids are displaced to allow binding. (92 aa)
Your Current Organism:
Haloarcula marismortui
NCBI taxonomy Id: 272569
Other names: H. marismortui ATCC 43049, Haloarcula marismortui ATCC 43049, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049
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