Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| clpA | clpP | KPN_00915 | KPN_00399 | ATP-binding component of serine protease; Belongs to the ClpA/ClpB family. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.989 |
| clpA | clpX | KPN_00915 | KPN_00400 | ATP-binding component of serine protease; Belongs to the ClpA/ClpB family. | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.623 |
| clpB | clpP | KPN_02915 | KPN_00399 | ATP-dependent protease, Hsp 100; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.956 |
| clpB | clpX | KPN_02915 | KPN_00400 | ATP-dependent protease, Hsp 100; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.613 |
| clpP | clpA | KPN_00399 | KPN_00915 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | ATP-binding component of serine protease; Belongs to the ClpA/ClpB family. | 0.989 |
| clpP | clpB | KPN_00399 | KPN_02915 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | ATP-dependent protease, Hsp 100; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.956 |
| clpP | clpX | KPN_00399 | KPN_00400 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.999 |
| clpX | clpA | KPN_00400 | KPN_00915 | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | ATP-binding component of serine protease; Belongs to the ClpA/ClpB family. | 0.623 |
| clpX | clpB | KPN_00400 | KPN_02915 | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | ATP-dependent protease, Hsp 100; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.613 |
| clpX | clpP | KPN_00400 | KPN_00399 | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.999 |
| cytR | pdhR | KPN_04229 | KPN_00117 | Regulator for deo operon, udp, cdd, tsx, nupC, and nupG. | Transcriptional regulator of pyruvate dehydrogenase complex. | 0.402 |
| envZ | narL | KPN_03774 | KPN_02217 | Osmolarity sensor protein. | Pleiotrophic regulation of anaerobic respiration; Response regulator for nar, frd, dms and tor genes. | 0.469 |
| envZ | ompR | KPN_03774 | KPN_03775 | Osmolarity sensor protein. | Osmolarity response regulator. | 0.998 |
| fadR | gcvA | KPN_02311 | KPN_03159 | Fatty acid metabolism regulator; Multifunctional regulator of fatty acid metabolism. | Positive regulator of gcv operon; Belongs to the LysR transcriptional regulatory family. | 0.696 |
| fadR | metJ | KPN_02311 | KPN_04232 | Fatty acid metabolism regulator; Multifunctional regulator of fatty acid metabolism. | Transcriptional repressor protein MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family. | 0.796 |
| fadR | pdhR | KPN_02311 | KPN_00117 | Fatty acid metabolism regulator; Multifunctional regulator of fatty acid metabolism. | Transcriptional regulator of pyruvate dehydrogenase complex. | 0.616 |
| gcvA | fadR | KPN_03159 | KPN_02311 | Positive regulator of gcv operon; Belongs to the LysR transcriptional regulatory family. | Fatty acid metabolism regulator; Multifunctional regulator of fatty acid metabolism. | 0.696 |
| gcvA | metJ | KPN_03159 | KPN_04232 | Positive regulator of gcv operon; Belongs to the LysR transcriptional regulatory family. | Transcriptional repressor protein MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family. | 0.571 |
| metJ | fadR | KPN_04232 | KPN_02311 | Transcriptional repressor protein MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family. | Fatty acid metabolism regulator; Multifunctional regulator of fatty acid metabolism. | 0.796 |
| metJ | gcvA | KPN_04232 | KPN_03159 | Transcriptional repressor protein MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family. | Positive regulator of gcv operon; Belongs to the LysR transcriptional regulatory family. | 0.571 |
page 1 of 2