Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aspC | clpX | KPN_00955 | KPN_00400 | Aspartate aminotransferase. | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.522 |
| aspC | dnaG | KPN_00955 | KPN_03473 | Aspartate aminotransferase. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.553 |
| aspC | lysP | KPN_00955 | KPN_02594 | Aspartate aminotransferase. | Lysine-specific permease. | 0.615 |
| aspC | mdh | KPN_00955 | KPN_03644 | Aspartate aminotransferase. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.831 |
| aspC | trpC | KPN_00955 | KPN_01255 | Aspartate aminotransferase. | Bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Belongs to the TrpC family. | 0.424 |
| clpX | aspC | KPN_00400 | KPN_00955 | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Aspartate aminotransferase. | 0.522 |
| clpX | dnaG | KPN_00400 | KPN_03473 | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.595 |
| clpX | groES | KPN_00400 | KPN_04532 | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.763 |
| clpX | lysP | KPN_00400 | KPN_02594 | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Lysine-specific permease. | 0.622 |
| clpX | mdh | KPN_00400 | KPN_03644 | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.428 |
| cutA | groES | KPN_04527 | KPN_04532 | Divalent cation tolerance protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.781 |
| cutA | trpC | KPN_04527 | KPN_01255 | Divalent cation tolerance protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | Bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Belongs to the TrpC family. | 0.797 |
| dnaG | aspC | KPN_03473 | KPN_00955 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Aspartate aminotransferase. | 0.553 |
| dnaG | clpX | KPN_03473 | KPN_00400 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.595 |
| dnaG | lysP | KPN_03473 | KPN_02594 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Lysine-specific permease. | 0.587 |
| groES | clpX | KPN_04532 | KPN_00400 | Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | ATP-dependent protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.763 |
| groES | cutA | KPN_04532 | KPN_04527 | Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | Divalent cation tolerance protein; Involved in resistance toward heavy metals. Belongs to the CutA family. | 0.781 |
| groES | mdh | KPN_04532 | KPN_03644 | Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.458 |
| groES | trpC | KPN_04532 | KPN_01255 | Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | Bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Belongs to the TrpC family. | 0.824 |
| lysP | aspC | KPN_02594 | KPN_00955 | Lysine-specific permease. | Aspartate aminotransferase. | 0.615 |
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