Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| flgK | flgL | lpg1225 | lpg1226 | Flagellar hook associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family. | Flagellar hook associated protein type 3 FlgL. | 0.998 |
| flgK | fliC | lpg1225 | lpg1340 | Flagellar hook associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.988 |
| flgK | fliD | lpg1225 | lpg1338 | Flagellar hook associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family. | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.994 |
| flgL | flgK | lpg1226 | lpg1225 | Flagellar hook associated protein type 3 FlgL. | Flagellar hook associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family. | 0.998 |
| flgL | fliC | lpg1226 | lpg1340 | Flagellar hook associated protein type 3 FlgL. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.978 |
| flgL | fliD | lpg1226 | lpg1338 | Flagellar hook associated protein type 3 FlgL. | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.993 |
| fliC | flgK | lpg1340 | lpg1225 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family. | 0.988 |
| fliC | flgL | lpg1340 | lpg1226 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook associated protein type 3 FlgL. | 0.978 |
| fliC | fliD | lpg1340 | lpg1338 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.994 |
| fliD | flgK | lpg1338 | lpg1225 | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family. | 0.994 |
| fliD | flgL | lpg1338 | lpg1226 | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook associated protein type 3 FlgL. | 0.993 |
| fliD | fliC | lpg1338 | lpg1340 | Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.994 |
| lasB | lpg0467 | lpg1655 | lpg0467 | Class 4 metalloprotease; Extracellular zinc metalloprotease. | Zinc metalloprotease; Extracellular zinc metalloprotease. | 0.418 |
| legA8 | lpg1918 | lpg0695 | lpg1918 | Ankyrin repeat-containing protein; Virulence effector that plays a role in hijacking the host vesicular trafficking by recruiting the small guanosine triphosphatase (GTPase) Rab1 to the cytosolic face of the Legionella-containing vacuole (LCVs). Acts as a phosphocholine transferase by mediating the addition of phosphocholine to Ser residues of host RAB1 (RAB1A, RAB1B or RAB1C) and RAB35, leading to displacement of GDP dissociation inhibitors (GDI). Phosphocholination of target proteins also impairs accessibility to GTPase effector LepB. Can act on both GDP-bound and GTP-bound Rab proteins. | Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.523 |
| legA8 | lpg2819 | lpg0695 | lpg2819 | Ankyrin repeat-containing protein; Virulence effector that plays a role in hijacking the host vesicular trafficking by recruiting the small guanosine triphosphatase (GTPase) Rab1 to the cytosolic face of the Legionella-containing vacuole (LCVs). Acts as a phosphocholine transferase by mediating the addition of phosphocholine to Ser residues of host RAB1 (RAB1A, RAB1B or RAB1C) and RAB35, leading to displacement of GDP dissociation inhibitors (GDI). Phosphocholination of target proteins also impairs accessibility to GTPase effector LepB. Can act on both GDP-bound and GTP-bound Rab proteins. | Tyrosine phosphatase II superfamily protein. | 0.683 |
| legG1 | legLC8 | lpg1976 | lpg1890 | UVB-resistance protein UVR8; Conserved gene; RCC-1. | Leucine-rich repeat- and coiled coil-containing protein; Conserved gene, like GALA proteins. | 0.527 |
| legG1 | legU2 | lpg1976 | lpg2830 | UVB-resistance protein UVR8; Conserved gene; RCC-1. | UBOX-containing protein; Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. This protein is an E3 ubiquitin ligase that interferes with host's ubiquitination pathway. Acts in conjunction with host E2 ubiquitin-conjugating enzymes UBE2D1 (UBCH5A) or UBE2D3 (UBCH5C), and mediates polyubiquitination of host kinase CLK1. | 0.460 |
| legG1 | lpg1975 | lpg1976 | lpg1975 | UVB-resistance protein UVR8; Conserved gene; RCC-1. | Hypothetical protein. | 0.773 |
| legLC8 | legG1 | lpg1890 | lpg1976 | Leucine-rich repeat- and coiled coil-containing protein; Conserved gene, like GALA proteins. | UVB-resistance protein UVR8; Conserved gene; RCC-1. | 0.527 |
| legLC8 | legU2 | lpg1890 | lpg2830 | Leucine-rich repeat- and coiled coil-containing protein; Conserved gene, like GALA proteins. | UBOX-containing protein; Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. This protein is an E3 ubiquitin ligase that interferes with host's ubiquitination pathway. Acts in conjunction with host E2 ubiquitin-conjugating enzymes UBE2D1 (UBCH5A) or UBE2D3 (UBCH5C), and mediates polyubiquitination of host kinase CLK1. | 0.495 |
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