STRINGSTRING
lin0300 lin0300 lin0301 lin0301 lin0562 lin0562 lin0635 lin0635 lin0758 lin0758 lin0793 lin0793 lin0850 lin0850 lin0880 lin0880 lin0881 lin0881 lin0882 lin0882 lin0927 lin0927 lin0930 lin0930 lin0931 lin0931 lin0932 lin0932 lin0943 lin0943 lin0944 lin0944 lin0945 lin0945 lin0953 lin0953 lin0954 lin0954 lin0963 lin0963 lin0964 lin0964 lin0975 lin0975 lin0976 lin0976 lin1000 lin1000 lin1006 lin1006 lin1007 lin1007 lin1008 lin1008 lin1009 lin1009 lin1019 lin1019 lin1020 lin1020 lin1021 lin1021 lin1057 lin1057 lin1058 lin1058 lin1199 lin1199 lin1225 lin1225 lin1226 lin1226 lin1313 lin1313 lin1344 lin1344 lin1370 lin1370 lin1371 lin1371 lin1373 lin1373 lin1374 lin1374 lin1375 lin1375 lin1378 lin1378 lin1379 lin1379 lin1380 lin1380 lin1381 lin1381 lin1382 lin1382 comGB comGB comGA comGA lin1419 lin1419 lin1439 lin1439 lin1468 lin1468 lin1479 lin1479 comEC comEC comEA comEA lin1530 lin1530 lin1563 lin1563 lin1584 lin1584 comC comC lin1617 lin1617 lin1626 lin1626 lin1627 lin1627 lin1636 lin1636 ccpA ccpA pheT-2 pheT-2 lin1649 lin1649 lin1651 lin1651 lin1652 lin1652 lin1653 lin1653 lin1665 lin1665 lin1676 lin1676 lin1677 lin1677 lin1678 lin1678 lin1776 lin1776 lin1790 lin1790 lin1795 lin1795 lin1798 lin1798 lin1805 lin1805 lin1819 lin1819 lin1872 lin1872 lin2002 lin2002 lin2003 lin2003 lin2004 lin2004 recU recU lin2007 lin2007 dnaD dnaD lin2012 lin2012 lin2034 lin2034 lin2035 lin2035 lin2036 lin2036 lin2055 lin2055 lin2057 lin2057 lin2058 lin2058 lin2080 lin2080 lin2081 lin2081 lin2151 lin2151 lin2152 lin2152 lin2154 lin2154 lin2157 lin2157 lin2159 lin2159 lin2160 lin2160 lin2161 lin2161 lin2162 lin2162 lin2224 lin2224 lin2225 lin2225 lin2260 lin2260 lin2280 lin2280 lin2293 lin2293 lin2295 lin2295 lin2313 lin2313 lin2317 lin2317 lin2318 lin2318 lin2319 lin2319 lin2320 lin2320 lin2321 lin2321 lin2322 lin2322 lin2323 lin2323 lin2324 lin2324 lin2325 lin2325 lin2326 lin2326 lin2327 lin2327 lin2491 lin2491 lin2492 lin2492 lin2532 lin2532 lin2533 lin2533 lin2544 lin2544 lin2546 lin2546 lin2613 lin2613 lin2614 lin2614 lin2615 lin2615 lin2616 lin2616 lin2617 lin2617 lin2622 lin2622 lin2623 lin2623 lin2624 lin2624 lgt lgt lin2626 lin2626 lin2627 lin2627 lin2628 lin2628 lin2629 lin2629 lin2630 lin2630 lin2633 lin2633 lin2634 lin2634 lin2635 lin2635 lin2645 lin2645 comFC comFC comFA comFA lin2671 lin2671 lin2705 lin2705 lin2707 lin2707 lin2711 lin2711
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lin0300Lin0300 protein. (221 aa)
lin0301C-terminal part similar to B. subtilis ComEC protein. (280 aa)
lin0562Lin0562 protein. (211 aa)
lin0635Lin0635 protein. (559 aa)
lin0758Similar to lipoate-protein ligase. (329 aa)
lin0793Lin0793 protein; Similar to B. subtilis YqkB protein; Belongs to the HesB/IscA family. (116 aa)
lin0850Lin0850 protein; Similar to carboxylesterase. (237 aa)
lin0880Lin0880 protein. (158 aa)
lin0881Lin0881 protein; Similar to B. subtilis YdbS protein. (160 aa)
lin0882Lin0882 protein; Similar to B. subtilis YbtB protein. (494 aa)
lin0927Lin0927 protein; Hypothetical transmembrane protein; Belongs to the LTA synthase family. (653 aa)
lin0930Conserved hypothetical protein, similar to B. subtilis YhfI protein. (243 aa)
lin0931Similar to lipoate protein ligase A. (331 aa)
lin0932TVP38/TMEM64 family membrane protein. (201 aa)
lin0943Lin0943 protein; Similar to B. subtilis YneR protein; Belongs to the HesB/IscA family. (100 aa)
lin0944Lin0944 protein; Similar to C-terminal part of B. subtilis ComEC protein and to ComEA. (376 aa)
lin0945Lin0945 protein. (75 aa)
lin0953Lin0953 protein. (104 aa)
lin0954Lin0954 protein. (281 aa)
lin0963UPF0413 protein lin0963; Similar to B. subtilis YjbH protein; Belongs to the UPF0413 family. (272 aa)
lin0964Lin0964 protein; Similar to B. subtilis YjbK protein. (194 aa)
lin0975Lin0975 protein; Similar to B. subtilis YjcF protein. (145 aa)
lin0976Lin0976 protein; Similar to B. subtilis YjcH protein. (249 aa)
lin1000Similar to B. subtilis protein YkvS. (89 aa)
lin1006Lin1006 protein. (73 aa)
lin1007Lin1007 protein; Similar to B. subtilis YkuJ protein. (77 aa)
lin1008Lin1008 protein; Similar to B. subtilis YkuL protein. (150 aa)
lin1009Lin1009 protein; Similar to transcription regulator (LysR family); Belongs to the LysR transcriptional regulatory family. (292 aa)
lin1019Lin1019 protein; Similar to B. subtilis YvqF protein. (237 aa)
lin1020Similar to two-component sensor histidine kinase in particular B. subtilis YvqE protein. (352 aa)
lin1021Lin1021 protein; Similar to two-component response regulator, in particular B. subtilis YvqC protein. (212 aa)
lin1057Lin1057 protein; Similar to B. subtilis YlaI protein. (76 aa)
lin1058UPF0358 protein lin1058; Similar to B. subtilis YlaN protein; Belongs to the UPF0358 family. (93 aa)
lin1199Lin1199 protein; Similar to B. subtilis YslB protein. (161 aa)
lin1225Lin1225 protein. (154 aa)
lin1226Lin1226 protein. (306 aa)
lin1313Lin1313 protein; Similar to polypeptide deformylase, similar to B. subtilis Smf protein. (286 aa)
lin1344UPF0154 protein lin1344; Highly similar to B. subtilis YneF protein. (79 aa)
lin1370Lin1370 protein; Similar to B. subtilis YqzC protein. (159 aa)
lin1371Lin1371 protein; Similar to B. subtilis YqzD protein. (118 aa)
lin1373Similar to 5-formyltetrahydrofolate cyclo-ligase. (179 aa)
lin1374Lin1374 protein; Similar to B. subtilis yqgP. (512 aa)
lin1375Lin1375 protein; Similar to B. subtilis yqgQ. (70 aa)
lin1378Lin1378 protein; Weakly similar to B. subtilis comG operon protein 7 (comGG). (105 aa)
lin1379Lin1379 protein; Similar to B. subtilis comG operon protein 6. (154 aa)
lin1380Similar to comG operon protein 5 (comGE). (94 aa)
lin1381Similar to comG operon protein 4 (comGD). (140 aa)
lin1382ComG operon protein 3; Required for transformation and DNA binding. (107 aa)
comGBComGB protein; Similar to B. subtilis comG operon protein 2. (343 aa)
comGAComGA protein; Similar to B. subtilis comG operon protein 1. (340 aa)
lin1419Lin1419 protein. (115 aa)
lin1439Lin1439 protein; Similar to B. subtilis YmcA protein; Belongs to the UPF0342 family. (120 aa)
lin1468Similar to unknown proteins. (186 aa)
lin1479Similar to unknown proteins. (266 aa)
comECComEC protein; Similar to putative integral membrane protein ComEC specifically required for DNA uptake but not for binding. (746 aa)
comEAComEA protein; Similar to integral membrane protein ComEA. (200 aa)
lin1530Similar to unknown proteins. (210 aa)
lin1563Similar to unknown proteins. (97 aa)
lin1584UPF0758 protein lin1584; Similar to DNA repair protein RadC; Belongs to the UPF0758 family. (224 aa)
comCComC protein; Similar to B. subtilis late competence protein ComC (type IV prepilin peptidase). (236 aa)
lin1617Lin1617 protein; Weakly similar to site specific DNA-methyltransferase. (332 aa)
lin1626Similar to unknown proteins. (178 aa)
lin1627Lin1627 protein; Similar to proteases. (337 aa)
lin1636Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. (571 aa)
ccpACatabolite control protein A. (335 aa)
pheT-2Similar phenylalanyl-tRNA synthetase (beta subunit); Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. (205 aa)
lin1649UPF0354 protein lin1649; Similar to unknown proteins; Belongs to the UPF0354 family. (266 aa)
lin1651Lin1651 protein. (72 aa)
lin1652Lin1652 protein; Similar to aminopeptidase. (357 aa)
lin1653Similar to unknown proteins. (103 aa)
lin1665Lin1665 protein; Similar to putative transporters. (537 aa)
lin1676Similar to unknown proteins. (142 aa)
lin1677Lin1677 protein; Similar to similar to ABC transporter (ATP-binding protein). (306 aa)
lin1678Similar to membrane proteins. (355 aa)
lin1776Lin1776 protein; Some similarity to hypothetical proteins. (80 aa)
lin1790Lin1790 protein; Similar to transmembrane transport proteins. (385 aa)
lin1795UPF0374 protein lin1795; Similar to hypothetical proteins; Belongs to the UPF0374 family. (175 aa)
lin1798Lin1798 protein; Similar to hypothetical proteins. (326 aa)
lin1805Lin1805 protein; Similar to putative transmembrane proteins; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (321 aa)
lin1819UPF0435 protein lin1819; Belongs to the UPF0435 family. (73 aa)
lin1872Heptaprenylglyceryl phosphate synthase; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. (225 aa)
lin2002Cell cycle protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation. (113 aa)
lin2003UPF0398 protein lin2003; Similar to conserved hypothetical proteins; Belongs to the UPF0398 family. (181 aa)
lin2004Lin2004 protein; Similar to conserved hypothetical proteins. (121 aa)
recUHolliday junction resolvase RecU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation (By similarity). Belongs to the RecU family. (201 aa)
lin2007Lin2007 protein. (163 aa)
dnaDDnaD protein; Similar to chromosome replication initiation protein. (239 aa)
lin2012Lin2012 protein; Similar to hypothetical proteins. (173 aa)
lin2034Similar to unknown proteins. (198 aa)
lin2035UPF0302 protein lin2035; Similar to unknown proteins; Belongs to the UPF0302 family. (181 aa)
lin2036Similar to unknown proteins. (417 aa)
lin2055Similar to unknown proteins. (243 aa)
lin2057Similar to unknown proteins. (335 aa)
lin2058Lin2058 protein; Similar to ferredoxin. (74 aa)
lin2080Similar to unknown proteins. (219 aa)
lin2081Uncharacterized protein Lin2081; Similar to toxic ion resistance proteins; Belongs to the TelA family. (399 aa)
lin2151Lin2151 protein. (128 aa)
lin21522-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (301 aa)
lin2154Similar to unknown proteins. (178 aa)
lin2157Weakly similar to proteases. (346 aa)
lin2159Similar to unknown proteins. (185 aa)
lin2160UPF0298 protein lin2160; Similar to unknown proteins. (93 aa)
lin2161Similar to unknown proteins; Belongs to the UPF0342 family. (149 aa)
lin2162Similar to unknown proteins. (351 aa)
lin2224Similar to unknown proteins. (452 aa)
lin2225Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (273 aa)
lin2260Lin2260 protein. (113 aa)
lin2280Lin2280 protein. (115 aa)
lin2293Lin2293 protein; Similar to a putative competence protein from streptococcus pneumoniae. (371 aa)
lin2295Regulatory protein Spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily. (131 aa)
lin2313Lin2313 protein. (114 aa)
lin2317Lin2317 protein; Similar to ABC transporter (membrane protein). (407 aa)
lin2318Lin2318 protein; Similar to ABC transporter (ATP-binding protein). (250 aa)
lin2319Lin2319 protein; Similar to histidine triad (HIT) protein. (140 aa)
lin2320Lin2320 protein. (120 aa)
lin2321Lin2321 protein. (179 aa)
lin2322Foldase protein PrsA 2; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins. (291 aa)
lin23233'-5' exoribonuclease YhaM; Shows a 3'-5' exoribonuclease activity. (313 aa)
lin2324Similar to unknown proteins. (908 aa)
lin2325Similar to unknown proteins. (411 aa)
lin2326UPF0342 protein lin2326; Similar to unknown proteins; Belongs to the UPF0342 family. (117 aa)
lin2327UPF0754 membrane protein lin2327; Similar to unknown proteins. (377 aa)
lin2491UPF0349 protein lin2491; Similar to B. subtilis YuzB protein; Belongs to the UPF0349 family. (77 aa)
lin2492Lin2492 protein; Similar to B. subtilis YuzD protein. (108 aa)
lin2532Lin2532 protein. (170 aa)
lin2533Lin2533 protein. (113 aa)
lin2544Lin2544 protein; Similar to carboxylesterase. (248 aa)
lin2546Lin2546 protein; Similar to carboxylesterase. (247 aa)
lin2613Lin2613 protein; Similar to amino acid transporter. (463 aa)
lin2614NADPH dehydrogenase; Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes; Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily. (338 aa)
lin2615Probable cell division protein WhiA; Involved in cell division and chromosome segregation. (323 aa)
lin2616Gluconeogenesis factor; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. (322 aa)
lin2617Nucleotide-binding protein lin2617; Displays ATPase and GTPase activities. (291 aa)
lin2622Lin2622 protein. (491 aa)
lin2623Lin2623 protein; Similar to acetyltransferase. (165 aa)
lin2624Pyrophosphatase PpaX; Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK/P. Might play a role in controlling the intracellular pyrophosphate pool. (217 aa)
lgtPhosphatidylglycerol--prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. (277 aa)
lin2626HPr-P(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable c [...] (312 aa)
lin2627Lin2627 protein; Similar to B. subtilis YvlD protein. (117 aa)
lin2628Lin2628 protein; Similar to B. subtilis yvlC protein. (66 aa)
lin2629Lin2629 protein. (403 aa)
lin2630Lin2630 protein; Similar to B. subtilis YvlB protein. (416 aa)
lin2633Lin2633 protein; Similar to B. subtilis CsbA protein. (79 aa)
lin2634Lin2634 protein. (215 aa)
lin2635Lin2635 protein. (128 aa)
lin2645Lin2645 protein. (391 aa)
comFCComFC protein; Similar to late competence protein comFC. (218 aa)
comFAComFA protein; Similar to late competence protein comFA. (439 aa)
lin2671Lin2671 protein; Similar to B. subtilis YwzB protein. (78 aa)
lin2705Probable DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. (178 aa)
lin2707Lin2707 protein. (149 aa)
lin2711Lipoyl-[GcvH]:protein N-lipoyltransferase; Catalyzes the amidotransfer (transamidation) of the lipoyl moiety from lipoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes. Takes part in a pathway for scavenging of lipoic acid; Belongs to the octanoyltransferase LipL family. (278 aa)
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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