STRINGSTRING
lin2827 lin2827 cheA cheA lin0802 lin0802 rsbT rsbT rsbW rsbW lin0941 lin0941 lin1020 lin1020 lin0043 lin0043 lin1137 lin1137 gyrB gyrB parE parE lisK lisK mutL mutL lin1543 lin1543 lin1852 lin1852 resE resE lin2119 lin2119 lin2515 lin2515 phoR phoR lin2727 lin2727 lin0316 lin0316
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lin2827Lin2827 protein; Similar to the two components sensor protein kdpD. (896 aa)
cheATwo-component sensor histidine kinase CheA; Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY (By similarity). (618 aa)
lin0802Lin0802 protein; Similar to two-component sensor histidine kinases. (433 aa)
rsbTRsbT protein; Highly similar to positive regulation of sigma-B activity. (136 aa)
rsbWsigma-B activity negative regulator RsbW; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). (157 aa)
lin0941Similar to heat shock protein HtpG. (564 aa)
lin1020Similar to two-component sensor histidine kinase in particular B. subtilis YvqE protein. (352 aa)
lin0043Lin0043 protein; Similar to sensor histidine kinase (AgrC from Staphylococcus). (431 aa)
lin1137Lin1137 protein; Similar to two-component sensor histidine kinase. (485 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (646 aa)
parEDNA topoisomerase 4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. (655 aa)
lisKTwo-component sensor histidine kinase. (483 aa)
mutLDNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (603 aa)
lin1543Lin1543 protein; Similar to two-component sensor histidine kinase. (479 aa)
lin1852Lin1852 protein; Similar to two-component sensor histidine kinase. (346 aa)
resEResE protein; Similar to two-component sensor histidine kinase (ResE). (596 aa)
lin2119Histidine kinase; Similar to two-component sensor histidine kinase. (577 aa)
lin2515Lin2515 protein; Similar to two-component sensor histidine kinase. (380 aa)
phoRTwo-component sensor histidine kinase. (591 aa)
lin2727Lin2727 protein; Similar to two-component sensor histidine kinase. (459 aa)
lin0316Lin0316 protein; Similar to two-component sensor histidine kinase. (610 aa)
Your Current Organism:
Listeria innocua
NCBI taxonomy Id: 272626
Other names: L. innocua Clip11262, Listeria innocua Clip11262, Listeria innocua str. Clip11262, Listeria innocua strain Clip11262
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