STRINGSTRING
ML0115 ML0115 ML1009 ML1009 ML1306 ML1306 ML1316 ML1316 ML1320 ML1320 ML1321 ML1321 prcB prcB prcA prcA ML1328 ML1328 ML1329 ML1329 ML1330 ML1330 clpX clpX ML1536 ML1536 ML2156 ML2156
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ML0115Conserved hypothetical protein; Interacts with the core proteasome alpha-subunit (PrcA) through its C-terminal hydrophobic-tyrosine-X motif (HbYX motif). Interaction of Bpa with the proteasome stimulates proteosomal peptidase and casein degradation activity, which suggests Bpa could play a role in the removal of non-native or damaged proteins by influencing the conformation of the proteasome complex upon interaction. Belongs to the Bpa family. (174 aa)
ML1009Conserved hypothetical protein; Identical to the previously sequenced Mycobacterium leprae hypothetical protein TR:Q49847 (EMBL:U00019) (326 aa); Fasta score E(): 0, 100.0% identity in 326 aa overlap. Also highly similar to a number of other proteins of unknown function e.g. Mycobacterium tuberculosis Rv2714 TR:O07213 (EMBL:Z96072) (324 aa); Fasta score E(): 0, 89.7% identity in 320 aa overlap. (326 aa)
ML1306Conserved hypothetical protein; Similar to several proteins of unkown function including: Mycobacterium tuberculosis RV2125 TR:O33260 (EMBL:Z97559) (292 aa); Fasta score E(): 0, 85.0% identity in 274 aa overlap and Streptomyces coelicolor TR:Q9S2K6 (EMBL:AL109732) (312 aa); Fasta score E(): 1.6e-07, 23.4% identity in 278 aa overlap. (274 aa)
ML1316Probable AAA-family ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. (609 aa)
ML1320Conserved hypothetical protein; Highly similar to many proteins of undefined function including: Rhodococcus sp. TR:Q53081 (EMBL:U26422) (499 aa); Fasta score E(): 0, 83.5% identity in 502 aa overlap and Mycobacterium tuberculosis RV2112C TR:O33247 (EMBL:Z97559) (554 aa); Fasta score E(): 0, 95.4% identity in 504 aa overlap. (514 aa)
ML1321Conserved hypothetical protein; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. (63 aa)
prcBProteasome [beta]-type subunit 2; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family. (291 aa)
prcAProteasome [alpha]-type subunit 1; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. (265 aa)
ML1328Possible DNA-binding protein; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side- chain amino group of a substrate lysine. (452 aa)
ML1329Conserved hypothetical protein; Does not seem to be involved in pupylation or substrate degradation; Belongs to the PafB family. (331 aa)
ML1330Possible DNA-binding protein; Does not seem to be involved in pupylation or substrate degradation; Belongs to the PafC family. (324 aa)
clpXATP-dependent Clp protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (426 aa)
ML1536Conserved hypothetical protein; Highly similar to several Mycobacterium tuberculosis proteins of undefined function e.g. SW:YH98_MYCTU (O53947) (610 aa); Fasta score E(): 0, 89.7% identity in 609 aa overlap. The C-terminus of this protein is also similar to several including: Bacillus subtilis stage V sporulation protein K SW:SP5K_BACSU (P27643) (322 aa); Fasta score E(): 2.2e-20, 34.5% identity in 310 aa overlap. Contains PS00017 ATP/GTP-binding site motif A (P-loop). (610 aa)
ML2156Possible DNA-binding protein; Similar to Mycobacterium tuberculosis hypothetical 79.7 kda protein TR:O53874 (EMBL:AL022004) fasta scores: E(): 0, 77.6% in 753 aa, and to Streptomyces coelicolor hypothetical 90.4 kda protein TR:CAB93395 (EMBL:AL357524) fasta scores: E(): 3.9e-27, 34.6% in 856 aa. Contains a probable helix-turn-helix motif at aa 277-298 (Score 1075, SD +2.85). (753 aa)
Your Current Organism:
Mycobacterium leprae
NCBI taxonomy Id: 272631
Other names: M. leprae TN, Mycobacterium leprae TN, Mycobacterium leprae str. TN, Mycobacterium leprae strain TN
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