Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MSC_0325 | MSC_0444 | MSC_0325 | MSC_0444 | Hypothetical protein. | Deoxynucleoside kinase. | 0.901 |
| MSC_0325 | apt | MSC_0325 | MSC_0474 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.923 |
| MSC_0325 | dctD | MSC_0325 | MSC_0581 | Hypothetical protein. | dCMP deaminase. | 0.925 |
| MSC_0325 | pnp | MSC_0325 | MSC_0835 | Hypothetical protein. | Purine nucleoside phosphorylase. | 0.911 |
| MSC_0325 | purB | MSC_0325 | MSC_0849 | Hypothetical protein. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.902 |
| MSC_0444 | MSC_0325 | MSC_0444 | MSC_0325 | Deoxynucleoside kinase. | Hypothetical protein. | 0.901 |
| MSC_0444 | apt | MSC_0444 | MSC_0474 | Deoxynucleoside kinase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.923 |
| MSC_0444 | dctD | MSC_0444 | MSC_0581 | Deoxynucleoside kinase. | dCMP deaminase. | 0.925 |
| MSC_0444 | pnp | MSC_0444 | MSC_0835 | Deoxynucleoside kinase. | Purine nucleoside phosphorylase. | 0.911 |
| MSC_0444 | purB | MSC_0444 | MSC_0849 | Deoxynucleoside kinase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.902 |
| MSC_0444 | tmk | MSC_0444 | MSC_0046 | Deoxynucleoside kinase. | THYMIDYLATE KINASE; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.612 |
| apt | MSC_0325 | MSC_0474 | MSC_0325 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein. | 0.923 |
| apt | MSC_0444 | MSC_0474 | MSC_0444 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Deoxynucleoside kinase. | 0.923 |
| apt | deoA | MSC_0474 | MSC_0830 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Thymidine phosphorylase. | 0.401 |
| apt | gmk | MSC_0474 | MSC_0218 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.971 |
| apt | guaC | MSC_0474 | MSC_0050 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides; Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily. | 0.943 |
| apt | hpt | MSC_0474 | MSC_0256 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.955 |
| apt | hpt-2 | MSC_0474 | MSC_0848 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.930 |
| apt | pnp | MSC_0474 | MSC_0835 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Purine nucleoside phosphorylase. | 0.977 |
| apt | purA | MSC_0474 | MSC_0850 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.774 |
page 1 of 9