Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PAB0405 | PAB1013 | PAB0405 | PAB1013 | Predicted serine/threonine protein kinase, rio1 family. | Predicted serine/threonine protein kinase, RIO-like. | 0.979 |
| PAB0405 | nob1 | PAB0405 | PAB0882 | Predicted serine/threonine protein kinase, rio1 family. | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. Processes pre-16S-rRNA at its 3' end (the D-site) to yield the mature 3' end (By similarity); Belongs to the PINc/VapC protein family. | 0.999 |
| PAB0405 | rnp3 | PAB0405 | PAB1136 | Predicted serine/threonine protein kinase, rio1 family. | Ribonuclease P subunit rpp30; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | 0.892 |
| PAB0405 | rps11P | PAB0405 | PAB0362 | Predicted serine/threonine protein kinase, rio1 family. | rps11P SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.999 |
| PAB0405 | rps4P | PAB0405 | PAB0361 | Predicted serine/threonine protein kinase, rio1 family. | rps4P SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
| PAB1013 | PAB0405 | PAB1013 | PAB0405 | Predicted serine/threonine protein kinase, RIO-like. | Predicted serine/threonine protein kinase, rio1 family. | 0.979 |
| PAB1013 | nob1 | PAB1013 | PAB0882 | Predicted serine/threonine protein kinase, RIO-like. | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. Processes pre-16S-rRNA at its 3' end (the D-site) to yield the mature 3' end (By similarity); Belongs to the PINc/VapC protein family. | 0.999 |
| PAB1013 | rnp3 | PAB1013 | PAB1136 | Predicted serine/threonine protein kinase, RIO-like. | Ribonuclease P subunit rpp30; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | 0.763 |
| PAB1013 | rps11P | PAB1013 | PAB0362 | Predicted serine/threonine protein kinase, RIO-like. | rps11P SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.999 |
| PAB1013 | rps4P | PAB1013 | PAB0361 | Predicted serine/threonine protein kinase, RIO-like. | rps4P SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
| nob1 | PAB0405 | PAB0882 | PAB0405 | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. Processes pre-16S-rRNA at its 3' end (the D-site) to yield the mature 3' end (By similarity); Belongs to the PINc/VapC protein family. | Predicted serine/threonine protein kinase, rio1 family. | 0.999 |
| nob1 | PAB1013 | PAB0882 | PAB1013 | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. Processes pre-16S-rRNA at its 3' end (the D-site) to yield the mature 3' end (By similarity); Belongs to the PINc/VapC protein family. | Predicted serine/threonine protein kinase, RIO-like. | 0.999 |
| nob1 | rnp3 | PAB0882 | PAB1136 | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. Processes pre-16S-rRNA at its 3' end (the D-site) to yield the mature 3' end (By similarity); Belongs to the PINc/VapC protein family. | Ribonuclease P subunit rpp30; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | 0.999 |
| nob1 | rps11P | PAB0882 | PAB0362 | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. Processes pre-16S-rRNA at its 3' end (the D-site) to yield the mature 3' end (By similarity); Belongs to the PINc/VapC protein family. | rps11P SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.999 |
| nob1 | rps4P | PAB0882 | PAB0361 | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. Processes pre-16S-rRNA at its 3' end (the D-site) to yield the mature 3' end (By similarity); Belongs to the PINc/VapC protein family. | rps4P SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
| rnp3 | PAB0405 | PAB1136 | PAB0405 | Ribonuclease P subunit rpp30; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | Predicted serine/threonine protein kinase, rio1 family. | 0.892 |
| rnp3 | PAB1013 | PAB1136 | PAB1013 | Ribonuclease P subunit rpp30; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | Predicted serine/threonine protein kinase, RIO-like. | 0.763 |
| rnp3 | nob1 | PAB1136 | PAB0882 | Ribonuclease P subunit rpp30; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. Processes pre-16S-rRNA at its 3' end (the D-site) to yield the mature 3' end (By similarity); Belongs to the PINc/VapC protein family. | 0.999 |
| rnp3 | rps11P | PAB1136 | PAB0362 | Ribonuclease P subunit rpp30; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | rps11P SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.999 |
| rnp3 | rps4P | PAB1136 | PAB0361 | Ribonuclease P subunit rpp30; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | rps4P SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
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