STRINGSTRING
hupT hupT hupU hupU hupV hupV hypF hypF hupA hupA hupB hupB hupC hupC hupD hupD hupF hupF hupG hupG hupH hupH hupJ hupJ hupK hupK hypA hypA hypB hypB hupR hupR hypC hypC hypD hypD hypE hypE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hupTSignal transduction histidine kinase HupT. (456 aa)
hupUUptake hydrogenase, small subunit. (332 aa)
hupVUptake hydrogenase, large subunit. (476 aa)
hypFHydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. (739 aa)
hupAHydrogenase, small subunit. (358 aa)
hupBHydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (597 aa)
hupCHydrogenase, cytochrome b subunit. (262 aa)
hupDHydrogenase maturation protease HupD. (210 aa)
hupFHydrogenase maturation chaperone HupF. (106 aa)
hupGHydrogenase expression/formation protein HupG; Belongs to the HupG/HyaE family. (138 aa)
hupHHydrogenase expression/formation protein HupH. (275 aa)
hupJRubredoxin HupJ. (278 aa)
hupKHydrogenase expression/formation protein HupK. (294 aa)
hypAHydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa)
hypBHydrogenase nickel incorporation protein HypB. (335 aa)
hupRHydrogenase transcriptional regulator HupR. (492 aa)
hypCHydrogenase assembly chaperone HypC/HupF. (96 aa)
hypDHydrogenase expression/formation protein HypD; Belongs to the HypD family. (377 aa)
hypEHydrogenase expression/formation protein HypE. (340 aa)
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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