STRINGSTRING
hupT hupT hupU hupU hupV hupV hupA hupA hupB hupB hupC hupC hupD hupD hupF hupF hupG hupG hupH hupH hupJ hupJ hupK hupK hupR hupR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hupTSignal transduction histidine kinase HupT. (456 aa)
hupUUptake hydrogenase, small subunit. (332 aa)
hupVUptake hydrogenase, large subunit. (476 aa)
hupAHydrogenase, small subunit. (358 aa)
hupBHydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (597 aa)
hupCHydrogenase, cytochrome b subunit. (262 aa)
hupDHydrogenase maturation protease HupD. (210 aa)
hupFHydrogenase maturation chaperone HupF. (106 aa)
hupGHydrogenase expression/formation protein HupG; Belongs to the HupG/HyaE family. (138 aa)
hupHHydrogenase expression/formation protein HupH. (275 aa)
hupJRubredoxin HupJ. (278 aa)
hupKHydrogenase expression/formation protein HupK. (294 aa)
hupRHydrogenase transcriptional regulator HupR. (492 aa)
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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