5 items (Rhodobacter capsulatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hypA	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa)
	hypB	Hydrogenase nickel incorporation protein HypB. (335 aa)
	hypC	Hydrogenase assembly chaperone HypC/HupF. (96 aa)
	hypD	Hydrogenase expression/formation protein HypD; Belongs to the HypD family. (377 aa)
	hypE	Hydrogenase expression/formation protein HypE. (340 aa)

Your Current Organism:

Rhodobacter capsulatus

NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hypA	hypB	RCAP_rcc00776	RCAP_rcc00777	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Hydrogenase nickel incorporation protein HypB.	0.995
hypA	hypC	RCAP_rcc00776	RCAP_rcc00779	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Hydrogenase assembly chaperone HypC/HupF.	0.991
hypA	hypD	RCAP_rcc00776	RCAP_rcc00780	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Hydrogenase expression/formation protein HypD; Belongs to the HypD family.	0.991
hypA	hypE	RCAP_rcc00776	RCAP_rcc00781	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Hydrogenase expression/formation protein HypE.	0.982
hypB	hypA	RCAP_rcc00777	RCAP_rcc00776	Hydrogenase nickel incorporation protein HypB.	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	0.995
hypB	hypC	RCAP_rcc00777	RCAP_rcc00779	Hydrogenase nickel incorporation protein HypB.	Hydrogenase assembly chaperone HypC/HupF.	0.995
hypB	hypD	RCAP_rcc00777	RCAP_rcc00780	Hydrogenase nickel incorporation protein HypB.	Hydrogenase expression/formation protein HypD; Belongs to the HypD family.	0.996
hypB	hypE	RCAP_rcc00777	RCAP_rcc00781	Hydrogenase nickel incorporation protein HypB.	Hydrogenase expression/formation protein HypE.	0.980
hypC	hypA	RCAP_rcc00779	RCAP_rcc00776	Hydrogenase assembly chaperone HypC/HupF.	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	0.991
hypC	hypB	RCAP_rcc00779	RCAP_rcc00777	Hydrogenase assembly chaperone HypC/HupF.	Hydrogenase nickel incorporation protein HypB.	0.995
hypC	hypD	RCAP_rcc00779	RCAP_rcc00780	Hydrogenase assembly chaperone HypC/HupF.	Hydrogenase expression/formation protein HypD; Belongs to the HypD family.	0.999
hypC	hypE	RCAP_rcc00779	RCAP_rcc00781	Hydrogenase assembly chaperone HypC/HupF.	Hydrogenase expression/formation protein HypE.	0.995
hypD	hypA	RCAP_rcc00780	RCAP_rcc00776	Hydrogenase expression/formation protein HypD; Belongs to the HypD family.	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	0.991
hypD	hypB	RCAP_rcc00780	RCAP_rcc00777	Hydrogenase expression/formation protein HypD; Belongs to the HypD family.	Hydrogenase nickel incorporation protein HypB.	0.996
hypD	hypC	RCAP_rcc00780	RCAP_rcc00779	Hydrogenase expression/formation protein HypD; Belongs to the HypD family.	Hydrogenase assembly chaperone HypC/HupF.	0.999
hypD	hypE	RCAP_rcc00780	RCAP_rcc00781	Hydrogenase expression/formation protein HypD; Belongs to the HypD family.	Hydrogenase expression/formation protein HypE.	0.999
hypE	hypA	RCAP_rcc00781	RCAP_rcc00776	Hydrogenase expression/formation protein HypE.	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	0.982
hypE	hypB	RCAP_rcc00781	RCAP_rcc00777	Hydrogenase expression/formation protein HypE.	Hydrogenase nickel incorporation protein HypB.	0.980
hypE	hypC	RCAP_rcc00781	RCAP_rcc00779	Hydrogenase expression/formation protein HypE.	Hydrogenase assembly chaperone HypC/HupF.	0.995
hypE	hypD	RCAP_rcc00781	RCAP_rcc00780	Hydrogenase expression/formation protein HypE.	Hydrogenase expression/formation protein HypD; Belongs to the HypD family.	0.999