STRINGSTRING
hupK hupK hupB hupB hupA hupA hupV hupV hupU hupU hoxH hoxH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hupKHydrogenase expression/formation protein HupK. (294 aa)
hupBHydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (597 aa)
hupAHydrogenase, small subunit. (358 aa)
hupVUptake hydrogenase, large subunit. (476 aa)
hupUUptake hydrogenase, small subunit. (332 aa)
hoxHNAD-reducing hydrogenase HoxS, beta subunit. (503 aa)
Your Current Organism:
Rhodobacter capsulatus
NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003
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