15 items (Rhodobacter capsulatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ADE85378.1	Outer membrane chaperone Skp family protein. (191 aa)
	ADE84002.1	Abortive infection protein family. (292 aa)
	ADE84301.1	Acetyltransferase, GNAT family. (236 aa)
	hupD	Hydrogenase maturation protease HupD. (210 aa)
	hupF	Hydrogenase maturation chaperone HupF. (106 aa)
	hypA	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa)
	hypC	Hydrogenase assembly chaperone HypC/HupF. (96 aa)
	hypD	Hydrogenase expression/formation protein HypD; Belongs to the HypD family. (377 aa)
	hypE	Hydrogenase expression/formation protein HypE. (340 aa)
	lipB	Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (220 aa)
	lipA	Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (320 aa)
	rimJ	Ribosomal-protein-alanine N-acetyltransferase. (194 aa)
	rimI	Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. (139 aa)
	ADE87024.1	Radical SAM family protein. (408 aa)
	lepB	Signal peptidase I; Belongs to the peptidase S26 family. (265 aa)

Your Current Organism:

Rhodobacter capsulatus

NCBI taxonomy Id: 272942
Other names: R. capsulatus SB 1003, Rhodobacter capsulatus SB 1003

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hupD	hupF	RCAP_rcc00770	RCAP_rcc00771	Hydrogenase maturation protease HupD.	Hydrogenase maturation chaperone HupF.	0.992
hupD	hypA	RCAP_rcc00770	RCAP_rcc00776	Hydrogenase maturation protease HupD.	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	0.959
hupD	hypC	RCAP_rcc00770	RCAP_rcc00779	Hydrogenase maturation protease HupD.	Hydrogenase assembly chaperone HypC/HupF.	0.971
hupD	hypD	RCAP_rcc00770	RCAP_rcc00780	Hydrogenase maturation protease HupD.	Hydrogenase expression/formation protein HypD; Belongs to the HypD family.	0.913
hupD	hypE	RCAP_rcc00770	RCAP_rcc00781	Hydrogenase maturation protease HupD.	Hydrogenase expression/formation protein HypE.	0.780
hupF	hupD	RCAP_rcc00771	RCAP_rcc00770	Hydrogenase maturation chaperone HupF.	Hydrogenase maturation protease HupD.	0.992
hupF	hypA	RCAP_rcc00771	RCAP_rcc00776	Hydrogenase maturation chaperone HupF.	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	0.919
hupF	hypC	RCAP_rcc00771	RCAP_rcc00779	Hydrogenase maturation chaperone HupF.	Hydrogenase assembly chaperone HypC/HupF.	0.959
hupF	hypD	RCAP_rcc00771	RCAP_rcc00780	Hydrogenase maturation chaperone HupF.	Hydrogenase expression/formation protein HypD; Belongs to the HypD family.	0.988
hupF	hypE	RCAP_rcc00771	RCAP_rcc00781	Hydrogenase maturation chaperone HupF.	Hydrogenase expression/formation protein HypE.	0.905
hypA	hupD	RCAP_rcc00776	RCAP_rcc00770	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Hydrogenase maturation protease HupD.	0.959
hypA	hupF	RCAP_rcc00776	RCAP_rcc00771	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Hydrogenase maturation chaperone HupF.	0.919
hypA	hypC	RCAP_rcc00776	RCAP_rcc00779	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Hydrogenase assembly chaperone HypC/HupF.	0.991
hypA	hypD	RCAP_rcc00776	RCAP_rcc00780	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Hydrogenase expression/formation protein HypD; Belongs to the HypD family.	0.991
hypA	hypE	RCAP_rcc00776	RCAP_rcc00781	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Hydrogenase expression/formation protein HypE.	0.982
hypC	hupD	RCAP_rcc00779	RCAP_rcc00770	Hydrogenase assembly chaperone HypC/HupF.	Hydrogenase maturation protease HupD.	0.971
hypC	hupF	RCAP_rcc00779	RCAP_rcc00771	Hydrogenase assembly chaperone HypC/HupF.	Hydrogenase maturation chaperone HupF.	0.959
hypC	hypA	RCAP_rcc00779	RCAP_rcc00776	Hydrogenase assembly chaperone HypC/HupF.	Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	0.991
hypC	hypD	RCAP_rcc00779	RCAP_rcc00780	Hydrogenase assembly chaperone HypC/HupF.	Hydrogenase expression/formation protein HypD; Belongs to the HypD family.	0.999
hypC	hypE	RCAP_rcc00779	RCAP_rcc00781	Hydrogenase assembly chaperone HypC/HupF.	Hydrogenase expression/formation protein HypE.	0.995