STRINGSTRING
RSP_0335 RSP_0335 RSP_0030 RSP_0030 cheA3 cheA3 RSP_0085 RSP_0085 RSP_0169 RSP_0169 RSP_0203 RSP_0203 RSP_0454 RSP_0454 hupT hupT RSP_0512 RSP_0512 dctS dctS RSP_1056 RSP_1056 RSP_1063 RSP_1063 kdpD kdpD RSP_1306 RSP_1306 RSP_1357 RSP_1357 prrB prrB RSP_1567 RSP_1567 RSP_1611 RSP_1611 RSP_1682 RSP_1682 RSP_1683 RSP_1683 RSP_2129 RSP_2129 RSP_2229 RSP_2229 RSP_2280 RSP_2280 RSP_2407 RSP_2407 RSP_2555 RSP_2555 RSP_2558 RSP_2558 RSP_2592 RSP_2592 flhS flhS ntrB ntrB ntrY ntrY gfdS gfdS RSP_2881 RSP_2881 phoR phoR dorS dorS RSP_3086 RSP_3086 RSP_3101 RSP_3101 RSP_3105 RSP_3105 RSP_3240 RSP_3240 RSP_3402 RSP_3402 RSP_3431 RSP_3431 RSP_3512 RSP_3512
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RSP_0335Diguanylate cyclase/phosphodiesterase; IMG reference gene:2512955345; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (789 aa)
RSP_0030Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); IMG reference gene:2512955013; PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain. (833 aa)
cheA3Chemotaxis histidine protein kinase, CheA3; IMG reference gene:2512955031; PFAM: CheW-like domain; Hpt domain. (1095 aa)
RSP_0085Multisensor hybrid histidine kinase; IMG reference gene:2512955075; PFAM: Response regulator receiver domain; His Kinase A (phospho-acceptor) domain; PAS fold; Hpt domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box; truncated by 19 aa. (869 aa)
RSP_0169Na+/solute symporter; IMG reference gene:2512955167; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (894 aa)
RSP_0203Signal transduction kinase protein; IMG reference gene:2512955200; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (439 aa)
RSP_0454IMG reference gene:2512955464; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain. (768 aa)
hupTHydrogen uptake histidine-kinase; IMG reference gene:2512955502; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold. (443 aa)
RSP_0512PAS/PAC sensor hybrid histidine kinase; IMG reference gene:2512955524; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (945 aa)
dctSPAS/PAC sensor signal transduction histidine kinase; IMG reference gene:2512955941; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (661 aa)
RSP_1056Periplasmic sensor signal transduction histidine kinase; IMG reference gene:2512956097; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (466 aa)
RSP_1063Diguanylate cyclase/phosphodiesterase; IMG reference gene:2512956104; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (508 aa)
kdpDOsmosensitive K+ channel histidine kinase; IMG reference gene:2512956312; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Universal stress protein family; His Kinase A (phosphoacceptor) domain; Osmosensitive K+ channel His kinase sensor domain. (887 aa)
RSP_1306PAS sensor Signal Tranduction Histidine Kinase; IMG reference gene:2512956353; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box. (949 aa)
RSP_1357Cytoplasmic sensor hybrid histidine kinase; IMG reference gene:2512956404; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain. (849 aa)
prrBSensor histidine kinase PrrB (RegB); Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as well as in regulation of expression of genes involved in alternative CO2 fixation pathways. Phosphorylates RegA/PrrA. (462 aa)
RSP_1567Putative sensory transduction histidine kinase; IMG reference gene:2512953462; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (855 aa)
RSP_1611Sensor histidine kinase; IMG reference gene:2512953509; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (597 aa)
RSP_1682IMG reference gene:2512953586; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (572 aa)
RSP_1683Hpr(Ser) kinase/phosphatase; IMG reference gene:2512953587; PFAM: HPr Serine kinase C-terminal domain. (142 aa)
RSP_2129Sensor Histidine kinase; IMG reference gene:2512954053; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (587 aa)
RSP_2229Chemotaxis multidomain, CheB methylesterase/CheR, Methylase; IMG reference gene:2512954158; PFAM: CheB methylesterase; HWE histidine kinase; CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; PAS fold; TIGRFAM: PAS domain S-box. (1170 aa)
RSP_2280PAS sensor hybrid histidine kinase; IMG reference gene:2512954214; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold. (640 aa)
RSP_2407Periplasmic sensor hybrid histidine kinase; IMG reference gene:2512954351; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (575 aa)
RSP_2555IMG reference gene:2512954499; PFAM: Coenzyme PQQ synthesis protein D (PqqD). (86 aa)
RSP_2558Hpr(Ser) kinase/phosphatase; IMG reference gene:2512954502; PFAM: HPr Serine kinase C-terminal domain. (306 aa)
RSP_2592Hypothetical protein; IMG reference gene:2512954535; PFAM: FIST C domain; FIST N domain. (386 aa)
flhSHybrid histidine kinase; IMG reference gene:2512954536; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (477 aa)
ntrBNitrogen regulation protein, NtrB signal transduction histidine kinase; IMG reference gene:2512954768; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold. (368 aa)
ntrYNitrogen regulation protein, NtrY, Signal transduction histidine kinase; IMG reference gene:2512954766; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; truncated by 16 aa. (753 aa)
gfdSIMG reference gene:2512954842; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain. (733 aa)
RSP_2881Hypothetical protein; IMG reference gene:2512954843; PFAM: FIST C domain; FIST N domain. (390 aa)
phoRPutative two-component sensor histidine kinase; IMG reference gene:2512954877; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (346 aa)
dorSIMG reference gene:2512956545; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain. (813 aa)
RSP_3086Periplasmic sensor signal transduction histidine kinase; IMG reference gene:2512956589; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (438 aa)
RSP_3101Periplasmic sensor diguanylate cyclase/phosphodiesterase; IMG reference gene:2512956603; PFAM: EAL domain; GGDEF domain; CHASE4 domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (772 aa)
RSP_3105PAS sensor protein; IMG reference gene:2512956609; PFAM: HWE histidine kinase; PAS fold; TIGRFAM: PAS domain S-box. (728 aa)
RSP_3240Periplasmic sensor signal transduction histidine kinase; IMG reference gene:2512956749; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (464 aa)
RSP_3402Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); IMG reference gene:2512956912; PFAM: EAL domain; GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; truncated by 3 aa. (878 aa)
RSP_3431Periplasmic sensor signal transduction histidine kinase; IMG reference gene:2512956942; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (450 aa)
RSP_3512Periplasmic sensor signal transduction histidine kinase; IMG reference gene:2512957023; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (447 aa)
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
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