STRINGSTRING
ntrC ntrC acoR acoR nifA nifA RSP_0507 RSP_0507 fleQ fleQ torF torF RSP_2130 RSP_2130 RSP_1612 RSP_1612 RSP_1590 RSP_1590 acoR-2 acoR-2 ntrX ntrX
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ntrCNitrogen metabolism transcriptional regulator, NtrC; IMG reference gene:2512954767; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (455 aa)
acoRPutative AcoR, Transcriptional activator of acetoin/glycerol metabolism; IMG reference gene:2512954815; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (645 aa)
nifANifA transcriptional activator; IMG reference gene:2512955560; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein. (581 aa)
RSP_0507HupR response regulator; IMG reference gene:2512955518; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (491 aa)
fleQSigma54 specific transcriptional regulator, fis family; IMG reference gene:2512955061; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; truncated by 43 aa. (366 aa)
torFTorf protein; IMG reference gene:2512955040; PFAM: Sigma-54 interaction domain. (378 aa)
RSP_2130Two component, sigma54 specific transcriptional regulator, fis family; IMG reference gene:2512954054; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (442 aa)
RSP_1612Sigma-54 dependent transcriptional regulator; IMG reference gene:2512953510; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (439 aa)
RSP_1590Two component, sigma54 specific, transcriptional regulator, fis family; IMG reference gene:2512953487; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (485 aa)
acoR-2Acetoin transcriptional regulator, sigma54 specific, AcoR; IMG reference gene:2512956830; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (611 aa)
ntrXNitrogen assimilation transcriptional regulator, NtrX; IMG reference gene:2512954765; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain. (476 aa)
Your Current Organism:
Rhodobacter sphaeroides 241
NCBI taxonomy Id: 272943
Other names: R. sphaeroides 2.4.1, Rhodobacter sphaeroides 2.4.1, Rhodobacter sphaeroides ATCC 17023, Rhodobacter sphaeroides ATH 2.4.1, Rhodobacter sphaeroides str. 2.4.1, Rhodobacter sphaeroides strain 2.4.1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.