Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DppF | RSP_1156 | RSP_0803 | RSP_1156 | ABC dipeptide transporter, ATPase subunit DppF; IMG reference gene:2512955832; PFAM: ABC transporter. | ABC transporter, ATPase subunit; IMG reference gene:2512956200; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter. | 0.477 |
| DppF | RSP_3033 | RSP_0803 | RSP_3033 | ABC dipeptide transporter, ATPase subunit DppF; IMG reference gene:2512955832; PFAM: ABC transporter. | ABC peptide/opine transporter, ATPase subunit; IMG reference gene:2512956532; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; Belongs to the ABC transporter superfamily. | 0.460 |
| DppF | RSP_3235 | RSP_0803 | RSP_3235 | ABC dipeptide transporter, ATPase subunit DppF; IMG reference gene:2512955832; PFAM: ABC transporter. | ABC peptide transporter, ATPase subunit; IMG reference gene:2512956745; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; Belongs to the ABC transporter superfamily. | 0.519 |
| LolD | RSP_1437 | RSP_0776 | RSP_1437 | ABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | ABC Fe+3 hydroxamate (ferrichrome) transporter, ATPase subunit; IMG reference gene:2512953328; PFAM: ABC transporter. | 0.426 |
| LolD | RSP_2405 | RSP_0776 | RSP_2405 | ABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit; IMG reference gene:2512954349; PFAM: ABC transporter. | 0.483 |
| LolD | RSP_2810 | RSP_0776 | RSP_2810 | ABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | ABC transporter, ATPase subunit; IMG reference gene:2512954803; PFAM: ABC transporter. | 0.448 |
| LolD | RSP_3413 | RSP_0776 | RSP_3413 | ABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | ABC Fe+3-siderophore transporter, ATPase subunit; IMG reference gene:2512956923; PFAM: ABC transporter. | 0.413 |
| LolD | ccmA | RSP_0776 | RSP_1801 | ABC lipoprotein efflux transporter, ATPase subunit, LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | ABC heme exporter, ATPase subunt CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.726 |
| RSP_0246 | RSP_0349 | RSP_0246 | RSP_0349 | ABC lipid efflux transporter, fused ATPase and inner membrane subunits; IMG reference gene:2512955252; PFAM: ABC transporter transmembrane region; ABC transporter. | ABC transporter, ATPase subunit; IMG reference gene:2512955359; PFAM: ABC transporter; TOBE domain. | 0.767 |
| RSP_0246 | RSP_1478 | RSP_0246 | RSP_1478 | ABC lipid efflux transporter, fused ATPase and inner membrane subunits; IMG reference gene:2512955252; PFAM: ABC transporter transmembrane region; ABC transporter. | IMG reference gene:2512953371; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; Belongs to the ABC transporter superfamily. | 0.569 |
| RSP_0246 | RSP_2586 | RSP_0246 | RSP_2586 | ABC lipid efflux transporter, fused ATPase and inner membrane subunits; IMG reference gene:2512955252; PFAM: ABC transporter transmembrane region; ABC transporter. | ABC multidrug efflux transporter, ATPase subunit; IMG reference gene:2512954529; PFAM: ABC transporter; TIGRFAM: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. | 0.754 |
| RSP_0246 | RSP_2696 | RSP_0246 | RSP_2696 | ABC lipid efflux transporter, fused ATPase and inner membrane subunits; IMG reference gene:2512955252; PFAM: ABC transporter transmembrane region; ABC transporter. | ABC transporter, fused ATPase and inner membrane subunits; IMG reference gene:2512954640; PFAM: ABC transporter transmembrane region; ABC transporter. | 0.595 |
| RSP_0246 | RSP_2895 | RSP_0246 | RSP_2895 | ABC lipid efflux transporter, fused ATPase and inner membrane subunits; IMG reference gene:2512955252; PFAM: ABC transporter transmembrane region; ABC transporter. | Putative ABC transporter, fused ATPase subunits; IMG reference gene:2512954857; PFAM: ABC transporter. | 0.400 |
| RSP_0246 | RSP_3159 | RSP_0246 | RSP_3159 | ABC lipid efflux transporter, fused ATPase and inner membrane subunits; IMG reference gene:2512955252; PFAM: ABC transporter transmembrane region; ABC transporter. | ABC transporter, 2 fused ATPase and 1 inner membrane subunits; IMG reference gene:2512956668; PFAM: ABC transporter. | 0.545 |
| RSP_0246 | RSP_3274 | RSP_0246 | RSP_3274 | ABC lipid efflux transporter, fused ATPase and inner membrane subunits; IMG reference gene:2512955252; PFAM: ABC transporter transmembrane region; ABC transporter. | ABC multidrug/carbohydrate efflux transporter, ATPase subunit; IMG reference gene:2512956780; PFAM: ABC transporter. | 0.430 |
| RSP_0344 | RSP_0349 | RSP_0344 | RSP_0349 | Nucleoside ABC transporter ATP-binding protein; IMG reference gene:2512955354; PFAM: ABC transporter. | ABC transporter, ATPase subunit; IMG reference gene:2512955359; PFAM: ABC transporter; TOBE domain. | 0.406 |
| RSP_0344 | RSP_2210 | RSP_0344 | RSP_2210 | Nucleoside ABC transporter ATP-binding protein; IMG reference gene:2512955354; PFAM: ABC transporter. | Nucleoside ABC transporter ATP-binding protein; IMG reference gene:2512954138; PFAM: ABC transporter. | 0.915 |
| RSP_0344 | RSP_3557 | RSP_0344 | RSP_3557 | Nucleoside ABC transporter ATP-binding protein; IMG reference gene:2512955354; PFAM: ABC transporter. | Nucleoside ABC transporter ATP-binding protein; IMG reference gene:2512957067; PFAM: ABC transporter. | 0.912 |
| RSP_0349 | RSP_0246 | RSP_0349 | RSP_0246 | ABC transporter, ATPase subunit; IMG reference gene:2512955359; PFAM: ABC transporter; TOBE domain. | ABC lipid efflux transporter, fused ATPase and inner membrane subunits; IMG reference gene:2512955252; PFAM: ABC transporter transmembrane region; ABC transporter. | 0.767 |
| RSP_0349 | RSP_0344 | RSP_0349 | RSP_0344 | ABC transporter, ATPase subunit; IMG reference gene:2512955359; PFAM: ABC transporter; TOBE domain. | Nucleoside ABC transporter ATP-binding protein; IMG reference gene:2512955354; PFAM: ABC transporter. | 0.406 |
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