STRINGSTRING
RP831 RP831 RP015 RP015 RP029 RP029 RP035 RP035 RP038 RP038 RP039 RP039 RP040 RP040 RP041 RP041 RP045 RP045 RP049 RP049 RP059 RP059 RP076 RP076 RP086 RP086 RP092 RP092 RP099 RP099 RP100 RP100 RP110 RP110 RP112 RP112 RP120 RP120 RP128 RP128 RP130 RP130 RP131 RP131 RP135 RP135 RP138 RP138 RP139 RP139 RP165 RP165 RP171 RP171 RP175 RP175 RP178 RP178 RP182 RP182 RP199 RP199 RP205 RP205 RP212 RP212 RP226 RP226 RP233 RP233 RP234 RP234 RP245 RP245 RP257 RP257 RP258 RP258 RP261 RP261 RP262 RP262 RP273 RP273 RP304 RP304 RP330 RP330 RP336 RP336 RP340 RP340 RP343 RP343 RP344 RP344 RP345 RP345 RP354 RP354 RP414 RP414 RP438 RP438 RP449 RP449 RP452 RP452 RP456 RP456 RP459 RP459 RP463 RP463 RP469 RP469 RP486 RP486 RP487 RP487 RP492 RP492 RP493 RP493 RP503 RP503 RP517 RP517 RP521 RP521 RP524 RP524 RP534 RP534 RP540 RP540 RP541 RP541 RP542 RP542 RP548 RP548 RP549 RP549 RP552 RP552 RP553 RP553 RP583 RP583 RP599 RP599 RP601 RP601 RP604 RP604 RP606 RP606 RP608 RP608 RP609 RP609 RP610 RP610 RP615 RP615 RP618 RP618 RP631 RP631 RP633 RP633 RP634 RP634 RP636 RP636 RP637 RP637 RP638 RP638 RP640 RP640 RP641 RP641 RP642 RP642 RP643 RP643 RP644 RP644 RP645 RP645 RP646 RP646 RP647 RP647 RP648 RP648 RP649 RP649 RP650 RP650 RP651 RP651 RP652 RP652 RP653 RP653 RP654 RP654 RP655 RP655 RP656 RP656 RP657 RP657 RP658 RP658 RP659 RP659 RP660 RP660 RP667 RP667 RP669 RP669 RP679 RP679 RP686 RP686 RP708 RP708 RP714 RP714 RP725 RP725 RP726 RP726 RP732 RP732 RP733 RP733 RP740 RP740 RP741 RP741 RP746 RP746 RP751 RP751 RP752 RP752 RP762 RP762 RP773 RP773 RP812 RP812 RP832 RP832 RP857 RP857 RP859 RP859 RP860 RP860 RP866 RP866 RP869 RP869 RP878 RP878 RP879 RP879 RP884 RP884
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RP831Unknown; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (148 aa)
RP015POLY(A) POLYMERASE (pcnB); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (387 aa)
RP029RECF PROTEIN (recF); The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (By similarity). (360 aa)
RP035ACETOACETYL-COA REDUCTASE (phbB). (241 aa)
RP038ACYL-COA DESATURASE 1 (aco1). (395 aa)
RP03930S RIBOSOMAL PROTEIN S6 (rpsF); Binds together with S18 to 16S ribosomal RNA. (121 aa)
RP04030S RIBOSOMAL PROTEIN S18 (rpsR); Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (95 aa)
RP04150S RIBOSOMAL PROTEIN L9 (rplI); Binds to the 23S rRNA. (171 aa)
RP045Unknown. (358 aa)
RP049CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE (pgsA); This protein catalyzes the committed step to the synthesis of the acidic phospholipids; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (181 aa)
RP059STAGE 0 SPORULATION PROTEIN J (spo0J); Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication (By similarity). (286 aa)
RP076Unknown; Transports S-adenosylmethionine. (294 aa)
RP08630S RIBOSOMAL PROTEIN S2 (rpsB); Belongs to the universal ribosomal protein uS2 family. (296 aa)
RP092Unknown. (334 aa)
RP09950S RIBOSOMAL PROTEIN L28 (rpmB); Belongs to the bacterial ribosomal protein bL28 family. (97 aa)
RP10050S RIBOSOMAL PROTEIN L31 (rpmE); Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. (78 aa)
RP110ACETATE KINASE (ackA); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (385 aa)
RP11250S RIBOSOMAL PROTEIN L19 (rplS); This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (138 aa)
RP120Unknown. (354 aa)
RP128SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT (sdhA). (596 aa)
RP13030S RIBOSOMAL PROTEIN S12 (rpsL); With S4 and S5 plays an important role in translational accuracy. (129 aa)
RP13130S RIBOSOMAL PROTEIN S7 (rpsG); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (160 aa)
RP135TRANSCRIPTION ANTITERMINATION PROTEIN NUSG (nusG); Participates in transcription elongation, termination and antitermination. (192 aa)
RP13850S RIBOSOMAL PROTEIN L10 (rplJ); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (169 aa)
RP13950S RIBOSOMAL PROTEIN L7/L12 (rplL); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (125 aa)
RP165Unknown. (368 aa)
RP171DNA-BINDING PROTEIN HU (hupA); Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions; Belongs to the bacterial histone-like protein family. (110 aa)
RP175PROBABLE OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE (hemN); Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (399 aa)
RP178Unknown; Catalyzes the conversion of 7,8-dihydroneopterin triphosphate (H2NTP) to 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) and acetaldehyde. (138 aa)
RP182DNA REPAIR PROTEIN RECN (recN); May be involved in recombinational repair of damaged DNA. (554 aa)
RP199ADRENODOXIN PRECURSOR (adx1); Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions; Belongs to the adrenodoxin/putidaredoxin family. (112 aa)
RP205MITOCHONDRIAL TRANSPORTER ATM1 PRECURSOR (atm1). (609 aa)
RP212PUTATIVE ATPASE N2B (n2B). (357 aa)
RP226Unknown. (584 aa)
RP23350S RIBOSOMAL PROTEIN L13 (rplM); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (155 aa)
RP23430S RIBOSOMAL PROTEIN S9 (rpsI); Belongs to the universal ribosomal protein uS9 family. (161 aa)
RP245BOLA PROTEIN HOMOLOG (bolA); Belongs to the BolA/IbaG family. (80 aa)
RP257CYTOCHROME C OXIDASE ASSEMBLY PROTEI (coxW); Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. (334 aa)
RP258Unknown; Responsible for synthesis of pseudouridine from uracil at positions 955, 2504 and 2580 in 23S ribosomal RNA; Belongs to the pseudouridine synthase RluA family. (303 aa)
RP261PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT PRECURSOR (pdhA); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity). (326 aa)
RP262PYRUVATE DEHYDROGENASE E1 COMPONENT, BETA SUBUNIT PRECURSOR (pdhB); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity). (326 aa)
RP273HEAT SHOCK PROTEIN (hsp22); Belongs to the small heat shock protein (HSP20) family. (163 aa)
RP304CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11 (cox11); Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. (178 aa)
RP330Unknown; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. (156 aa)
RP336Unknown. (407 aa)
RP340Unknown. (338 aa)
RP343Unknown. (252 aa)
RP344CAPM PROTEIN (capM1). (389 aa)
RP34530S RIBOSOMAL PROTEIN S4 (rpsD); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (205 aa)
RP354NADH DEHYDROGENASE I CHAIN D (nuoD); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (389 aa)
RP414CAPM PROTEIN (capM2). (338 aa)
RP438RECOMBINATION PROTEIN RECR (recR); May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (226 aa)
RP449THREONINE DEHYDRATASE (tdcB). (333 aa)
RP452Unknown; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (342 aa)
RP456RIBOSOMAL PROTEIN L36 (rpmJ); Belongs to the bacterial ribosomal protein bL36 family. (41 aa)
RP459Unknown; Belongs to the methyltransferase superfamily. (226 aa)
RP463Unknown. (276 aa)
RP469POSSIBLE 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE (plsC). (243 aa)
RP486NIFS PROTEIN HOMOLOG (spl1); Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. (410 aa)
RP487NIFS PROTEIN HOMOLOG (spl1). (376 aa)
RP492PYRUVATE,PHOSPHATE DIKINASE PRECURSOR (ppdK); Catalyzes the reversible phosphorylation of pyruvate and phosphate; Belongs to the PEP-utilizing enzyme family. (880 aa)
RP493ERYTHROCYTE ADDUCIN ALPHA SUBUNIT (addA). (231 aa)
RP50330S RIBOSOMAL PROTEIN S15 (rpsO); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (91 aa)
RP517PROBABLE SIGMA(54) MODULATION PROTEIN (yhbH). (143 aa)
RP52130S RIBOSOMAL PROTEIN S1 (rpsA); Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (By similarity). (568 aa)
RP524Unknown; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (80 aa)
RP534Unknown. (598 aa)
RP540POSSIBLE PRIMOSOMAL PROTEIN N (priA); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (648 aa)
RP5413-OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYASE (ubiX); Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (189 aa)
RP542PROBABLE REPLICATIVE DNA HELICASE (dnaB); Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (486 aa)
RP548Unknown. (115 aa)
RP549Unknown. (135 aa)
RP552TRANSLATION INITIATION FACTOR IF-2 (infB); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity); Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (831 aa)
RP553N UTILIZATION SUBSTANCE PROTEIN A (nusA); Participates in both transcription termination and antitermination. (503 aa)
RP583MAGNESIUM TRANSPORTER (mgtE); Acts as a magnesium transporter. (456 aa)
RP599Unknown. (87 aa)
RP601CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA (dnaA); Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids (By similarity). (463 aa)
RP604Unknown; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (365 aa)
RP606PROBABLE 50S RIBOSOMAL PROTEIN L25 (rplY); This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (203 aa)
RP60850S RIBOSOMAL PROTEIN L35 (rpmI); Belongs to the bacterial ribosomal protein bL35 family. (67 aa)
RP609CYANELLE 50S RIBOSOMAL PROTEIN L20 (rplT); Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity). (117 aa)
RP61050S RIBOSOMAL PROTEIN L34 (rpmH); Belongs to the bacterial ribosomal protein bL34 family. (44 aa)
RP615RIBOSOMAL PROTEIN S21 (rpsU); Belongs to the bacterial ribosomal protein bS21 family. (66 aa)
RP618PROPIONYL-COA CARBOXYLASE ALPHA CHAIN PRECURSOR (pccA). (665 aa)
RP631Unknown; Belongs to the DnaA family. (221 aa)
RP63330S RIBOSOMAL PROTEIN S20 (rpsT); Binds directly to 16S ribosomal RNA. (90 aa)
RP63450S RIBOSOMAL PROTEIN L17 (rplQ). (136 aa)
RP63630S RIBOSOMAL PROTEIN S11 (rpsK); Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (127 aa)
RP63730S RIBOSOMAL PROTEIN S13 (rpsM); Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (125 aa)
RP638ADENYLATE KINASE (adk); Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (213 aa)
RP64050S RIBOSOMAL PROTEIN L15 (rplO); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (150 aa)
RP64150S RIBOSOMAL PROTEIN L30 (rpmD). (63 aa)
RP64230S RIBOSOMAL PROTEIN S5 (rpsE); With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (175 aa)
RP64350S RIBOSOMAL PROTEIN L18 (rplR); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (118 aa)
RP64450S RIBOSOMAL PROTEIN L6 (rplF); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa)
RP64530S RIBOSOMAL PROTEIN S8 (rpsH); One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa)
RP646CYANELLE 30S RIBOSOMAL PROTEIN S14 (rpsN); Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
RP64750S RIBOSOMAL PROTEIN L5 (rplE); This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (179 aa)
RP64850S RIBOSOMAL PROTEIN L24 (rplX); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (113 aa)
RP64950S RIBOSOMAL PROTEIN L14 (rplN); Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
RP65030S RIBOSOMAL PROTEIN S17 (rpsQ); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (77 aa)
RP65150S RIBOSOMAL PROTEIN L29 (rpmC); Belongs to the universal ribosomal protein uL29 family. (71 aa)
RP65250S RIBOSOMAL PROTEIN L16 (rplP); Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (136 aa)
RP65330S RIBOSOMAL PROTEIN S3 (rpsC); Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (217 aa)
RP65450S RIBOSOMAL PROTEIN L22 (rplV); This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (119 aa)
RP65530S RIBOSOMAL PROTEIN S19 (rpsS); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
RP65650S RIBOSOMAL PROTEIN L2 (rplB); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (273 aa)
RP65750S RIBOSOMAL PROTEIN L23 (rplW); One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (98 aa)
RP65850S RIBOSOMAL PROTEIN L4 (rplD); One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (207 aa)
RP65950S RIBOSOMAL PROTEIN L3 (rplC); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (216 aa)
RP66030S RIBOSOMAL PROTEIN S10 (rpsJ); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (105 aa)
RP667Unknown. (190 aa)
RP669PUTATIVE ATP-DEPENDENT RNA HELICASE RHLE (rhlE). (407 aa)
RP679Unknown. (96 aa)
RP6864-HYDROXYBENZOATE OCTAPRENYLTRANSFERASE (ubiA); Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. (282 aa)
RP708INTEGRATION HOST FACTOR ALPHA-SUBUNIT (himA); Belongs to the bacterial histone-like protein family. (95 aa)
RP714ANKYRIN, BRAIN VARIANT 2 (ank2). (107 aa)
RP725Unknown. (100 aa)
RP726RIBONUCLEASE H (rnhA); Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (152 aa)
RP732DNA POLYMERASE III, EPSILON CHAIN (dnaQ); DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease (By similarity). (229 aa)
RP733SURFEIT LOCUS PROTEIN 1 (surf1). (244 aa)
RP740HEMOLYSIN C (tlyC). (303 aa)
RP741Unknown; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (180 aa)
RP746ENDONUCLEASE III (nth); DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (212 aa)
RP75150S RIBOSOMAL PROTEIN L21 (rplU); This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (105 aa)
RP75250S RIBOSOMAL PROTEIN L27 (rpmA); Belongs to the bacterial ribosomal protein bL27 family. (86 aa)
RP7623-OXOACYL REDUCTASE (fabG); Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (241 aa)
RP77350S RIBOSOMAL PROTEIN L32 (rpmF); Belongs to the bacterial ribosomal protein bL32 family. (65 aa)
RP812Unknown. (77 aa)
RP832PROTEIN P34 (p34). (300 aa)
RP857PSEUDOURIDYLATE SYNTHASE I (truA); Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (253 aa)
RP859DNA PRIMASE (dnaG); RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (616 aa)
RP860Unknown. (204 aa)
RP866Unknown; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (107 aa)
RP869Unknown. (249 aa)
RP87830S RIBOSOMAL PROTEIN S16 (rpsP); Belongs to the bacterial ribosomal protein bS16 family. (111 aa)
RP87950S RIBOSOMAL PROTEIN L33 (rpmG); Belongs to the bacterial ribosomal protein bL33 family. (56 aa)
RP884PROBABLE FERROCHELATASE (hemH); Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (346 aa)
Your Current Organism:
Rickettsia prowazekii
NCBI taxonomy Id: 272947
Other names: R. prowazekii str. Madrid E, Rickettsia prowazekii str. Madrid E, Rickettsia prowazekii strain Madrid E
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