STRINGSTRING
nfo nfo dck dck yqeH yqeH ALA97605.1 ALA97605.1 fhs fhs ybeY ybeY SKUN_0069 SKUN_0069 tadA tadA ALA97437.1 ALA97437.1 ALA97275.1 ALA97275.1 ALA97273.1 ALA97273.1 ALA97215.1 ALA97215.1 ALA97214.1 ALA97214.1 truA truA adk adk glyS glyS sufD sufD xseA xseA sufB sufB yrrK yrrK ALA98197.1 ALA98197.1 ALA98204.1 ALA98204.1 crr crr ALA98388.1 ALA98388.1 engD engD ALA97114.1 ALA97114.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nfoEndonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (308 aa)
dckDeoxyadenosine/deoxycytidine kinase. (204 aa)
yqeHGTP-binding protein YqeH. (358 aa)
ALA97605.1Bifunctional riboflavin kinase/FAD synthetase; Belongs to the ribF family. (295 aa)
fhsFormate-tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. (535 aa)
ybeYHypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (158 aa)
SKUN_00694-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Belongs to the GHMP kinase family. IspE subfamily. (248 aa)
tadAtRNA-specific adenosine deaminase. (159 aa)
ALA97437.1Putative MoxR-like ATPase. (513 aa)
ALA97275.1Cysteine methyltransferase. (77 aa)
ALA97273.1PTS system IIBC component. (121 aa)
ALA97215.1Putative GTPase; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (296 aa)
ALA97214.1Ribosome biogenesis GTPase. (127 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (260 aa)
adkAdenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (212 aa)
glySglycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. (455 aa)
sufDABC-type iron-sulfur cluster assembly transport system permease protein. (276 aa)
xseAPutative exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (430 aa)
sufBFeS assembly protein SufB. (470 aa)
yrrKHolliday junction resolvase-like protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (139 aa)
ALA98197.1Deoxynucleoside kinase. (202 aa)
ALA98204.1Deoxynucleoside kinase. (176 aa)
crrPTS system glucose-specific IIA component. (160 aa)
ALA98388.1HNH endonuclease, putative. (134 aa)
engDGTP-dependent nucleic acid-binding protein EngD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (366 aa)
ALA97114.1Hypothetical protein. (409 aa)
Your Current Organism:
Spiroplasma kunkelii
NCBI taxonomy Id: 273035
Other names: S. kunkelii CR2-3x, Spiroplasma kunkelii CR2-3x, Spiroplasma kunkelii str. CR2-3x, Spiroplasma kunkelii strain CR2-3x
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