STRINGSTRING
rpl7AE rpl7AE rplp0 rplp0 rpl1AB rpl1AB rpl15AB rpl15AB rpl30AB rpl30AB rpl18AB rpl18AB rpl19E rpl19E rpl32E rpl32E rpl6AB rpl6AB rpl5AB rpl5AB rpl24AB rpl24AB rpl14AB rpl14AB rpl22AB rpl22AB rpl2AB rpl2AB rpl4AE rpl4AE rpl3AB rpl3AB rpl15E rpl15E rpl21E rpl21E rpl39E rpl39E rpl14E rpl14E rpl29AB rpl29AB rpl23AB rpl23AB rpl37E rpl37E rpl10E rpl10E rpl13AB rpl13AB rpl30E rpl30E
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpl7AELSU ribosomal protein L7AE (rpl7AE); Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs; Belongs to the eukaryotic ribosomal protein eL8 family. (130 aa)
rplp0LSU acidic ribosomal protein P0 homolog (rplp0); Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. (338 aa)
rpl1ABLSU ribosomal protein L1AB (rpl1AB); Probably involved in E site tRNA release (By similarity). Binds directly to 23S rRNA (Probable). (218 aa)
rpl15ABLSU ribosomal protein L15AB (rpl15AB); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa)
rpl30ABLSU ribosomal protein L30AB (rpl30AB); Translation, Ribosomal Proteins. (158 aa)
rpl18ABLSU ribosomal protein L18AB (rpl18AB); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (199 aa)
rpl19ELSU ribosomal protein L19E (rpl19E); Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. (151 aa)
rpl32ELSU ribosomal protein L32E (rpl32E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL32 family. (138 aa)
rpl6ABLSU ribosomal protein L6AB (rpl6AB); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (181 aa)
rpl5ABLSU ribosomal protein L5AB (rpl5AB); This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (182 aa)
rpl24ABLSU ribosomal protein L24AB (rpl24AB); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (119 aa)
rpl14ABLSU ribosomal protein L14AB (rpl14AB); Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome. (138 aa)
rpl22ABLSU ribosomal protein L22AB (rpl22AB); This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (157 aa)
rpl2ABLSU ribosomal protein L2AB (rpl2AB); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (238 aa)
rpl4AELSU ribosomal protein L4AE (rpl4AE); One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (267 aa)
rpl3ABLSU ribosomal protein L3AB (rpl3AB); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (351 aa)
rpl15ELSU ribosomal protein L15E (rpl15E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL15 family. (216 aa)
rpl21ELSU ribosomal protein L21E (rpl21E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL21 family. (101 aa)
rpl39ELSU ribosomal protein L39E (rpl39E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL39 family. (53 aa)
rpl14ELSU ribosomal protein L14E (rpl14E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL14 family. (96 aa)
rpl29ABLSU ribosomal protein L29AB (rpl29AB); Translation, Ribosomal Proteins; Belongs to the universal ribosomal protein uL29 family. (73 aa)
rpl23ABLSU ribosomal protein L23AB (rpl23AB); Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. (81 aa)
rpl37ELSU ribosomal protein L37E (rpl37E); Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (61 aa)
rpl10ELSU ribosomal protein L10E (rpl10E); Translation, Ribosomal Proteins; Belongs to the universal ribosomal protein uL16 family. (178 aa)
rpl13ABLSU ribosomal protein L13AB (rpl13AB); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (149 aa)
rpl30ELSU ribosomal protein L30E (rpl30E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL30 family. (108 aa)
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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