STRINGSTRING
alkK-2 alkK-2 fadD-3 fadD-3 alkK-4 alkK-4 alkK-3 alkK-3 fadD-2 fadD-2 acd-2 acd-2 fadD-1 fadD-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
alkK-2Medium-chain-fatty-acid--CoA ligase (alkK-2); Lipid metabolism. (552 aa)
fadD-3Long-chain-fatty-acid--CoA ligase (fadD-3); Lipid metabolism. (513 aa)
alkK-4Medium-chain-fatty-acid--CoA ligase (alkK-4); Lipid metabolism. (537 aa)
alkK-3Medium-chain-fatty-acid--CoA ligase (alkK-3); Lipid metabolism. (507 aa)
fadD-2Long-chain-fatty-acid--CoA ligase (fadD-2); Lipid metabolism. (559 aa)
acd-2Acyl-CoA dehydrogenase (acd-2); Lipid metabolism. (516 aa)
fadD-1Long-chain-fatty-acid--CoA ligase (fadD-1); Lipid metabolism. (454 aa)
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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