(14 nodes) Helicase, C-terminal network (Saccharolobus solfataricus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SSO1999	ATP-dependent RNA helicase homolog; Helicases, Helicases. (515 aa)
	SSO2036	ATP-dependent RNA helicase; DEAD-family; Helicases; Belongs to the DEAD box helicase family. (360 aa)
	SSO1879	ATP-dependent helicase, putative; Contains a DNA/RNA helicase domain (DEAD/DEAH box); Helicases. (665 aa)
	hel308	DNA helicase related protein; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks. (715 aa)
	SSO1655	Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical; MG018/MG017/MG016 HOMOLOG. Protein is interrupted by orf SSO1654 encoded transposase; Helicases, Helicases. (124 aa)
	SSO1440	ATP-dependent RNA helicase homolog; Helicases, Helicases. (515 aa)
	Cas3	ATP-dependent RNA helicase related protein; Helicases. (572 aa)
	SSO0965	Lhr-like protein; Helicases. (933 aa)
	SSO0959	DNA repair protein rad25; Replication and Repair, Helicases. (551 aa)
	SSO0473	Close hits to probable DNA repair proteins and helicases; Replication and Repair, Helicases. (444 aa)
	SSO0394	Lhr-like protein; Helicases. (913 aa)
	SSO0112	Lhr-like protein; Helicases; Belongs to the helicase family. (875 aa)
	SSO0017	Lhr-like protein; Helicases. (739 aa)
	SSO1889	ATP-dependent RNA helicase; DEAD-family; Helicases; Belongs to the DEAD box helicase family. (343 aa)

Your Current Organism:

Saccharolobus solfataricus

NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SSO0473	SSO1655	SSO0473	SSO1655	Close hits to probable DNA repair proteins and helicases; Replication and Repair, Helicases.	Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical; MG018/MG017/MG016 HOMOLOG. Protein is interrupted by orf SSO1654 encoded transposase; Helicases, Helicases.	0.670
SSO0959	SSO1655	SSO0959	SSO1655	DNA repair protein rad25; Replication and Repair, Helicases.	Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical; MG018/MG017/MG016 HOMOLOG. Protein is interrupted by orf SSO1654 encoded transposase; Helicases, Helicases.	0.670
SSO1655	SSO0473	SSO1655	SSO0473	Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical; MG018/MG017/MG016 HOMOLOG. Protein is interrupted by orf SSO1654 encoded transposase; Helicases, Helicases.	Close hits to probable DNA repair proteins and helicases; Replication and Repair, Helicases.	0.670
SSO1655	SSO0959	SSO1655	SSO0959	Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical; MG018/MG017/MG016 HOMOLOG. Protein is interrupted by orf SSO1654 encoded transposase; Helicases, Helicases.	DNA repair protein rad25; Replication and Repair, Helicases.	0.670
SSO1655	SSO1879	SSO1655	SSO1879	Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical; MG018/MG017/MG016 HOMOLOG. Protein is interrupted by orf SSO1654 encoded transposase; Helicases, Helicases.	ATP-dependent helicase, putative; Contains a DNA/RNA helicase domain (DEAD/DEAH box); Helicases.	0.670
SSO1655	SSO1889	SSO1655	SSO1889	Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical; MG018/MG017/MG016 HOMOLOG. Protein is interrupted by orf SSO1654 encoded transposase; Helicases, Helicases.	ATP-dependent RNA helicase; DEAD-family; Helicases; Belongs to the DEAD box helicase family.	0.767
SSO1655	SSO2036	SSO1655	SSO2036	Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical; MG018/MG017/MG016 HOMOLOG. Protein is interrupted by orf SSO1654 encoded transposase; Helicases, Helicases.	ATP-dependent RNA helicase; DEAD-family; Helicases; Belongs to the DEAD box helicase family.	0.767
SSO1879	SSO1655	SSO1879	SSO1655	ATP-dependent helicase, putative; Contains a DNA/RNA helicase domain (DEAD/DEAH box); Helicases.	Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical; MG018/MG017/MG016 HOMOLOG. Protein is interrupted by orf SSO1654 encoded transposase; Helicases, Helicases.	0.670
SSO1889	SSO1655	SSO1889	SSO1655	ATP-dependent RNA helicase; DEAD-family; Helicases; Belongs to the DEAD box helicase family.	Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical; MG018/MG017/MG016 HOMOLOG. Protein is interrupted by orf SSO1654 encoded transposase; Helicases, Helicases.	0.767
SSO1889	hel308	SSO1889	SSO2462	ATP-dependent RNA helicase; DEAD-family; Helicases; Belongs to the DEAD box helicase family.	DNA helicase related protein; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.	0.787
SSO2036	SSO1655	SSO2036	SSO1655	ATP-dependent RNA helicase; DEAD-family; Helicases; Belongs to the DEAD box helicase family.	Helicase of the snf2/rad54 family (carboxy end fragment), hypothetical; MG018/MG017/MG016 HOMOLOG. Protein is interrupted by orf SSO1654 encoded transposase; Helicases, Helicases.	0.767
SSO2036	hel308	SSO2036	SSO2462	ATP-dependent RNA helicase; DEAD-family; Helicases; Belongs to the DEAD box helicase family.	DNA helicase related protein; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.	0.787
hel308	SSO1889	SSO2462	SSO1889	DNA helicase related protein; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.	ATP-dependent RNA helicase; DEAD-family; Helicases; Belongs to the DEAD box helicase family.	0.787
hel308	SSO2036	SSO2462	SSO2036	DNA helicase related protein; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.	ATP-dependent RNA helicase; DEAD-family; Helicases; Belongs to the DEAD box helicase family.	0.787