STRINGSTRING
SSO1879 SSO1879 SSO0112 SSO0112 SSO0017 SSO0017 SSO0313 SSO0313 SSO0394 SSO0394 topR-1 topR-1 SSO0473 SSO0473 SSO0959 SSO0959 topR-2 topR-2 SSO0965 SSO0965 Cas3 Cas3 SSO1440 SSO1440 hel308 hel308 SSO2036 SSO2036 SSO1999 SSO1999 SSO1889 SSO1889 SSO1653 SSO1653
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SSO1879ATP-dependent helicase, putative; Contains a DNA/RNA helicase domain (DEAD/DEAH box); Helicases. (665 aa)
SSO0112Lhr-like protein; Helicases; Belongs to the helicase family. (875 aa)
SSO0017Lhr-like protein; Helicases. (739 aa)
SSO0313DNA helicase; Similar to CHL1 (S.cerevisiae). Belongs to the RAD3/XPD subfamily of helicases; Helicases, Helicases. (550 aa)
SSO0394Lhr-like protein; Helicases. (913 aa)
topR-1Reverse gyrase (topR-1); Modifies the topological state of DNA by introducing positive supercoils in an ATP-dependent process. It cleaves transiently a single DNA strand and remains covalently bound to the 5' DNA end through a tyrosine residue. May be involved in rewinding the DNA strands in the regions of the chromosome that have opened up to allow transcription or replication (By similarity). Its activity is inhibited by the DNA- binding protein 7d (Sso7d), suggesting that the Sso7d activity might counteract the overwinding effect of reverse gyrase. In the C-terminal section; belongs [...] (1242 aa)
SSO0473Close hits to probable DNA repair proteins and helicases; Replication and Repair, Helicases. (444 aa)
SSO0959DNA repair protein rad25; Replication and Repair, Helicases. (551 aa)
topR-2Reverse gyrase (topR-2); Modifies the topological state of DNA by introducing positive supercoils in an ATP-dependent process. It cleaves transiently a single DNA strand and remains covalently bound to the 5' DNA end through a tyrosine residue. May be involved in rewinding the DNA strands in the regions of the chromosome that have opened up to allow transcription or replication; In the C-terminal section; belongs to the prokaryotic type I/III topoisomerase family. (1166 aa)
SSO0965Lhr-like protein; Helicases. (933 aa)
Cas3ATP-dependent RNA helicase related protein; Helicases. (572 aa)
SSO1440ATP-dependent RNA helicase homolog; Helicases, Helicases. (515 aa)
hel308DNA helicase related protein; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks. (715 aa)
SSO2036ATP-dependent RNA helicase; DEAD-family; Helicases; Belongs to the DEAD box helicase family. (360 aa)
SSO1999ATP-dependent RNA helicase homolog; Helicases, Helicases. (515 aa)
SSO1889ATP-dependent RNA helicase; DEAD-family; Helicases; Belongs to the DEAD box helicase family. (343 aa)
SSO1653Helicase of the snf2/rad54 family (amino end fragment), hypothetical; MG018/MG017/MG016 HOMOLOG. Protein is interrupted by orf SSO1654 encoded transposase; Helicases, Helicases. (802 aa)
Your Current Organism:
Saccharolobus solfataricus
NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2
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