6 items (Saccharolobus solfataricus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nusG	Transcription termination antitermination factor (nusG); Stimulates transcription elongation; Belongs to the archaeal Spt5 family. (157 aa)
	rps4E	SSU ribosomal protein S4E (rps4E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS4 family. (239 aa)
	rpl24AB	LSU ribosomal protein L24AB (rpl24AB); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (119 aa)
	rpl2AB	LSU ribosomal protein L2AB (rpl2AB); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (238 aa)
	eiF5A	Initiation factor 5A, hypothetical (eiF5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. (131 aa)
	rpl14E	LSU ribosomal protein L14E (rpl14E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL14 family. (96 aa)

Your Current Organism:

Saccharolobus solfataricus

NCBI taxonomy Id: 273057
Other names: S. solfataricus P2, Saccharolobus solfataricus P2, Sulfolobus solfataricus P2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
eiF5A	nusG	SSO0970	SSO0347	Initiation factor 5A, hypothetical (eiF5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.	Transcription termination antitermination factor (nusG); Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	0.903
eiF5A	rpl14E	SSO0970	SSO5763	Initiation factor 5A, hypothetical (eiF5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.	LSU ribosomal protein L14E (rpl14E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL14 family.	0.966
eiF5A	rpl24AB	SSO0970	SSO0707	Initiation factor 5A, hypothetical (eiF5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.	LSU ribosomal protein L24AB (rpl24AB); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.998
eiF5A	rpl2AB	SSO0970	SSO0716	Initiation factor 5A, hypothetical (eiF5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.	LSU ribosomal protein L2AB (rpl2AB); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.998
eiF5A	rps4E	SSO0970	SSO0705	Initiation factor 5A, hypothetical (eiF5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.	SSU ribosomal protein S4E (rps4E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS4 family.	0.992
nusG	eiF5A	SSO0347	SSO0970	Transcription termination antitermination factor (nusG); Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	Initiation factor 5A, hypothetical (eiF5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.	0.903
nusG	rpl24AB	SSO0347	SSO0707	Transcription termination antitermination factor (nusG); Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	LSU ribosomal protein L24AB (rpl24AB); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.988
nusG	rpl2AB	SSO0347	SSO0716	Transcription termination antitermination factor (nusG); Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	LSU ribosomal protein L2AB (rpl2AB); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.977
rpl14E	eiF5A	SSO5763	SSO0970	LSU ribosomal protein L14E (rpl14E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL14 family.	Initiation factor 5A, hypothetical (eiF5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.	0.966
rpl14E	rpl24AB	SSO5763	SSO0707	LSU ribosomal protein L14E (rpl14E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL14 family.	LSU ribosomal protein L24AB (rpl24AB); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.999
rpl14E	rpl2AB	SSO5763	SSO0716	LSU ribosomal protein L14E (rpl14E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL14 family.	LSU ribosomal protein L2AB (rpl2AB); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.999
rpl14E	rps4E	SSO5763	SSO0705	LSU ribosomal protein L14E (rpl14E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL14 family.	SSU ribosomal protein S4E (rps4E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
rpl24AB	eiF5A	SSO0707	SSO0970	LSU ribosomal protein L24AB (rpl24AB); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Initiation factor 5A, hypothetical (eiF5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.	0.998
rpl24AB	nusG	SSO0707	SSO0347	LSU ribosomal protein L24AB (rpl24AB); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Transcription termination antitermination factor (nusG); Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	0.988
rpl24AB	rpl14E	SSO0707	SSO5763	LSU ribosomal protein L24AB (rpl24AB); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L14E (rpl14E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL14 family.	0.999
rpl24AB	rpl2AB	SSO0707	SSO0716	LSU ribosomal protein L24AB (rpl24AB); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L2AB (rpl2AB); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.999
rpl24AB	rps4E	SSO0707	SSO0705	LSU ribosomal protein L24AB (rpl24AB); One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S4E (rps4E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
rpl2AB	eiF5A	SSO0716	SSO0970	LSU ribosomal protein L2AB (rpl2AB); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Initiation factor 5A, hypothetical (eiF5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.	0.998
rpl2AB	nusG	SSO0716	SSO0347	LSU ribosomal protein L2AB (rpl2AB); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Transcription termination antitermination factor (nusG); Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	0.977
rpl2AB	rpl14E	SSO0716	SSO5763	LSU ribosomal protein L2AB (rpl2AB); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L14E (rpl14E); Translation, Ribosomal Proteins; Belongs to the eukaryotic ribosomal protein eL14 family.	0.999