STRINGSTRING
amzA amzA ST2086 ST2086 ST2087 ST2087 STK_23220 STK_23220 ST2356 ST2356 STK_23565 STK_23565 tmcA-2 tmcA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
amzAArchaemetzincin; Probable zinc metalloprotease whose natural substrate is unknown. (177 aa)
ST2086Hypothetical protein. (153 aa)
ST2087Hypothetical protein. (233 aa)
STK_23220Hypothetical protein; Belongs to the UPF0282 family. (308 aa)
ST2356Hypothetical protein. (119 aa)
STK_23565Hypothetical protein; N-term changed (+15). (81 aa)
tmcA-2Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). (767 aa)
Your Current Organism:
Sulfurisphaera tokodaii
NCBI taxonomy Id: 273063
Other names: S. tokodaii str. 7, Sulfolobus sp. (strain 7), Sulfolobus sp. 7, Sulfolobus tokodaii str. 7, Sulfurisphaera tokodaii str. 7, Sulfurisphaera tokodaii strain 7
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