STRINGSTRING
xerA xerA ST1394 ST1394 ST1395 ST1395 upsX upsX upsE upsE upsF upsF upsA upsA upsB upsB ST1402 ST1402 ST1403 ST1403 ST1404 ST1404
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xerATyrosine recombinase XerA; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Belongs to the 'phage' integrase family. XerA subfamily. (284 aa)
ST1394Hypothetical protein; N-term changed (-333). (288 aa)
ST1395Hypothetical protein. (215 aa)
upsXUpsX protein. (670 aa)
upsEATPase UpsE. (474 aa)
upsFUpsF protein; N-term changed (-9). (490 aa)
upsAPilin. (155 aa)
upsBPilin. (131 aa)
ST1402Hypothetical protein. (189 aa)
ST1403Putative glycosyltransferase. (460 aa)
ST1404ATP-dependent DNA helicase. (873 aa)
Your Current Organism:
Sulfurisphaera tokodaii
NCBI taxonomy Id: 273063
Other names: S. tokodaii str. 7, Sulfolobus sp. (strain 7), Sulfolobus sp. 7, Sulfolobus tokodaii str. 7, Sulfurisphaera tokodaii str. 7, Sulfurisphaera tokodaii strain 7
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