STRINGSTRING
TTE0115 TTE0115 PspF PspF AtoC AtoC ManX ManX TTE0193 TTE0193 TTE0194 TTE0194 PspF7 PspF7 CelB CelB TTE0334 TTE0334 CelA CelA CelC CelC CelF CelF BglB BglB MtlA MtlA TTE0340 TTE0340 PtsN2 PtsN2 MtlD MtlD PtsG PtsG NagE NagE TTE0598 TTE0598 CelA2 CelA2 CelB2 CelB2 CelC2 CelC2 RpoN RpoN FruB FruB AtoC2 AtoC2 PtsA PtsA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TTE0115Hypothetical protein. (80 aa)
PspFNtrC family Transcriptional regulator, ATPase domain protein; Best Blastp hit = gi|126223|sp|P23914|LEVR_BACSU TRANSCRIPTIONAL REGULATORY PROTEIN LEVR gi|98399|pir||A39160 transcription activator of levanase operon levR - Bacillus subtilis gi|143150|gb|AAA22572.1| (M60105) levR [Bacillus subtilis] gi|2108261|emb|CAA63460.1| (X92868) transcriptional regulatory protein [Bacillus subtilis] gi|2635154|emb|CAB14650.1| (Z99117) transcriptional regulator (NifA/NtrC family) [Bacillus subtilis], score 417, E-value 1.00E-115. (967 aa)
AtoCAAA superfamily ATPases with N-terminal receiver domain; Best Blastp hit = gi|126223|sp|P23914|LEVR_BACSU TRANSCRIPTIONAL REGULATORY PROTEIN LEVR gi|98399|pir||A39160 transcription activator of levanase operon levR - Bacillus subtilis gi|143150|gb|AAA22572.1| (M60105) levR [Bacillus subtilis] gi|2108261|emb|CAA63460.1| (X92868) transcriptional regulatory protein [Bacillus subtilis] gi|2635154|emb|CAB14650.1| (Z99117) transcriptional regulator (NifA/NtrC family) [Bacillus subtilis], score 431, E-value 1.00E-119. (931 aa)
ManXPhosphotransferase system, mannose/fructose-specific component IIA; Best Blastp hit = gi|12721142|gb|AAK02918.1| (AE006122) unknown [Pasteurella multocida], score 68.2, E-value 4.00E-11. (136 aa)
TTE0193Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; Best Blastp hit = gi|1142714|gb|AAB04152.1| (U28163) phosphoenolpyruvate:mannose phosphotransferase element IIB [Lactobacillus curvatus], score 105, E-value 3.00E-22. (167 aa)
TTE0194Mannose-specific PTS enzyme IID; Best Blastp hit = gi|131485|sp|P08188|PTND_ECOLI 'PTS SYSTEM, MANNOSE-SPECIFIC IID COMPONENT (EIID-MAN) (MANNOSE-PERMEASE IID COMPONENT) (PHOSPHOTRANSFERASE ENZYME II, D COMPONENT) (EII-M-MAN)' gi|66860|pir||WQECMM 'phosphotransferase system enzyme II (EC 2.7.1.69), mannose-specific, factor IID - Escherichia coli' gi|147404|gb|AAA24445.1| (J02699) mannose permease subunit II-M-Man [Escherichia coli] gi|1736464|dbj|BAA15631.1| '(D90826) PTS system, Mannose-specific IID component (EIID-MAN) (Mannose- permease IID component) (Phosphotransferase enzyme II, [...] (554 aa)
PspF7NtrC family Transcriptional regulator, ATPase domain protein; Best Blastp hit = gi|126223|sp|P23914|LEVR_BACSU TRANSCRIPTIONAL REGULATORY PROTEIN LEVR gi|98399|pir||A39160 transcription activator of levanase operon levR - Bacillus subtilis gi|143150|gb|AAA22572.1| (M60105) levR [Bacillus subtilis] gi|2108261|emb|CAA63460.1| (X92868) transcriptional regulatory protein [Bacillus subtilis] gi|2635154|emb|CAB14650.1| (Z99117) transcriptional regulator (NifA/NtrC family) [Bacillus subtilis], score 458, E-value 1.00E-127. (901 aa)
CelBPhosphotransferase system cellobiose-specific component IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (429 aa)
TTE0334Conserved hypothetical protein; Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides. (249 aa)
CelABest Blastp hit = gi|11497017|ref|NP_046992.1| 'PTS system, cellobiose-specific IIB component (celA) [Borrelia burgdorferi]' gi|7450521|pir||B70217 'PTS system, cellobiose-specific IIB component (celA) homolog - Lyme disease spirochete plasmid B/cp26' gi|2689898|gb|AAC66322.1| '(AE000792) PTS system, cellobiose-specific IIB component (celA) [Borrelia burgdorferi]' gi|4101692|gb|AAD01257.1| (AF006036) unknown [Borrelia burgdorferi], score 86.7, E-value 8.00E-17. (103 aa)
CelCBest Blastp hit = gi|1172708|sp|P46319|PTCA_BACSU 'PTS SYSTEM, CELLOBIOSE-SPECIFIC IIA COMPONENT (EIIA-CEL) (CELLOBIOSE-PERMEASE IIA COMPONENT) (PHOSPHOTRANSFERASE ENZYME II, A COMPONENT) (EIII-CEL)' gi|1361403|pir||S57761 probable cellobiose phosphotransferase enzyme III - Bacillus subtilis gi|7434479|pir||D69651 PTS lichenan-specific enzyme IIA component licA - Bacillus subtilis gi|895750|emb|CAA90287.1| (Z49992) putative cellobiose phosphotransferase enzyme III [Bacillus subtilis] gi|1783268|dbj|BAA11745.1| (D83026) cellobiose phosphotransferase enzyme III [Bacillus subtilis] gi|263 [...] (110 aa)
CelFAlpha-galactosidases/6-phospho-beta- glucosidases, family 4 of glycosyl hydrolases; Best Blastp hit = gi|1168884|sp|P46320|CELF_BACSU PROBABLE 6-PHOSPHO-BETA-GLUCOSIDASE gi|1361399|pir||S57762 6-phospho-beta-glucosidase (EC 3.2.1.86) licH - Bacillus subtilis gi|895751|emb|CAA90288.1| (Z49992) putative 6-phospho-beta-glucosidase [Bacillus subtilis] gi|2636391|emb|CAB15882.1| (Z99123) 6-phospho-beta-glucosidase [Bacillus subtilis], score 545, E-value 1.00E-154. (436 aa)
BglBBeta-glucosidase/6-phospho-beta- glucosidase/beta- galactosidase; Best Blastp hit = gi|7435434|pir||D69785 beta-glucosidase homolog ydhP - Bacillus subtilis gi|1945100|dbj|BAA19708.1| (D88802) C. thermocellum beta-glucosidase; P26208 (985) [Bacillus subtilis] gi|2632897|emb|CAB12403.1| (Z99107) similar to beta-glucosidase [Bacillus subtilis], score 705, E-value 0; Belongs to the glycosyl hydrolase 1 family. (464 aa)
MtlAPhosphotransferase system, mannitol-specific IIBC component; Best Blastp hit = gi|3025454|gb|AAC12848.1| (U53868) MtlA [Clostridium acetobutylicum], score 544, E-value 1.00E-154. (477 aa)
TTE0340Putative transcriptional regulator; Best Blastp hit = gi|3025455|gb|AAC12849.1| (U53868) MtlR [Clostridium acetobutylicum], score 481, E-value 1.00E-134. (673 aa)
PtsN2Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Best Blastp hit = gi|3025456|gb|AAC12850.1| (U53868) MtlF [Clostridium acetobutylicum], score 154, E-value 7.00E-37. (146 aa)
MtlDMannitol-1-phosphate/altronate dehydrogenases; Best Blastp hit = gi|8134573|sp|O65992|MTLD_CLOAB MANNITOL-1-PHOSPHATE 5-DEHYDROGENASE gi|3025457|gb|AAC12851.1| (U53868) MtlD [Clostridium acetobutylicum], score 404, E-value 1.00E-111. (386 aa)
PtsGPhosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; Best Blastp hit = gi|10173035|dbj|BAB04141.1| '(AP001508) PTS system, N-acetylglucosamine-specific enzyme II, ABC component [Bacillus halodurans]', score 418, E-value 1.00E-116. (449 aa)
NagEPhosphotransferase system IIA components; Best Blastp hit = gi|10174132|dbj|BAB05234.1| '(AP001512) PTS system, glucose-specific enzyme II, A component [Bacillus halodurans]', score 166, E-value 2.00E-40. (164 aa)
TTE0598Putative transcriptional regulator; Best Blastp hit = gi|1480429|gb|AAC44464.1| (U18943) putative transcriptional regulator [Bacillus stearothermophilus], score 297, E-value 3.00E-79. (694 aa)
CelA2Best Blastp hit = gi|11280254|pir||D82219 'PTS system, cellobiose-specific IIB component VC1281 [imported] - Vibrio cholerae (group O1 strain N16961)' gi|9655767|gb|AAF94440.1| '(AE004207) PTS system, cellobiose-specific IIB component [Vibrio cholerae]', score 70.9, E-value 4.00E-12. (108 aa)
CelB2Phosphotransferase system cellobiose-specific component IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (436 aa)
CelC2Best Blastp hit = gi|1172708|sp|P46319|PTCA_BACSU 'PTS SYSTEM, CELLOBIOSE-SPECIFIC IIA COMPONENT (EIIA-CEL) (CELLOBIOSE-PERMEASE IIA COMPONENT) (PHOSPHOTRANSFERASE ENZYME II, A COMPONENT) (EIII-CEL)' gi|1361403|pir||S57761 probable cellobiose phosphotransferase enzyme III - Bacillus subtilis gi|7434479|pir||D69651 PTS lichenan-specific enzyme IIA component licA - Bacillus subtilis gi|895750|emb|CAA90287.1| (Z49992) putative cellobiose phosphotransferase enzyme III [Bacillus subtilis] gi|1783268|dbj|BAA11745.1| (D83026) cellobiose phosphotransferase enzyme III [Bacillus subtilis] gi|263 [...] (105 aa)
RpoNBest Blastp hit = gi|10176187|dbj|BAB07282.1| (AP001519) RNA polymerase sigma factor (sigma54) [Bacillus halodurans], score 280, E-value 2.00E-74. (451 aa)
FruBPhosphotransferase system, HPr-related proteins; Best Blastp hit = gi|10176190|dbj|BAB07285.1| (AP001519) phosphocarrier protein HPr (catabolite repression) [Bacillus halodurans], score 103, E-value 4.00E-22. (88 aa)
AtoC2AAA superfamily ATPases with N-terminal receiver domain; Best Blastp hit = gi|10176524|dbj|BAB07618.1| (AP001520) transcriptional regulator [Bacillus halodurans], score 311, E-value 1.00E-83. (549 aa)
PtsAPhosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (573 aa)
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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