STRINGSTRING
TTE0598 TTE0598 TTE0340 TTE0340 MtlA MtlA CelA CelA SgaB SgaB PtsN4 PtsN4 TTE0182 TTE0182 FruA FruA CelA2 CelA2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TTE0598Putative transcriptional regulator; Best Blastp hit = gi|1480429|gb|AAC44464.1| (U18943) putative transcriptional regulator [Bacillus stearothermophilus], score 297, E-value 3.00E-79. (694 aa)
TTE0340Putative transcriptional regulator; Best Blastp hit = gi|3025455|gb|AAC12849.1| (U53868) MtlR [Clostridium acetobutylicum], score 481, E-value 1.00E-134. (673 aa)
MtlAPhosphotransferase system, mannitol-specific IIBC component; Best Blastp hit = gi|3025454|gb|AAC12848.1| (U53868) MtlA [Clostridium acetobutylicum], score 544, E-value 1.00E-154. (477 aa)
CelABest Blastp hit = gi|11497017|ref|NP_046992.1| 'PTS system, cellobiose-specific IIB component (celA) [Borrelia burgdorferi]' gi|7450521|pir||B70217 'PTS system, cellobiose-specific IIB component (celA) homolog - Lyme disease spirochete plasmid B/cp26' gi|2689898|gb|AAC66322.1| '(AE000792) PTS system, cellobiose-specific IIB component (celA) [Borrelia burgdorferi]' gi|4101692|gb|AAD01257.1| (AF006036) unknown [Borrelia burgdorferi], score 86.7, E-value 8.00E-17. (103 aa)
SgaBPhosphotransferase system component IIB of unknown specificity; Best Blastp hit = gi|13469797|gb|AAK27336.1| (AF286670) unknown [Escherichia coli], score 66.2, E-value 1.00E-10. (103 aa)
PtsN4Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); Best Blastp hit = gi|10172832|dbj|BAB03939.1| (AP001507) BH0220; unknown conserved protein [Bacillus halodurans], score 308, E-value 1.00E-82. (693 aa)
TTE0182Best Blastp hit = gi|10172803|dbj|BAB03910.1| '(AP001507) PTS system, galactitol-specific enzyme II, B component [Bacillus halodurans]', score 91.3, E-value 2.00E-18. (97 aa)
FruABest Blastp hit = gi|131491|sp|P23387|PTFB_RHOCA 'PTS SYSTEM, FRUCTOSE-SPECIFIC IIBC COMPONENT (EIIBC-FRU) (FRUCTOSE-PERMEASE IIBC COMPONENT) (PHOSPHOTRANSFERASE ENZYME II, BC COMPONENT) (EII-FRU)' gi|97494|pir||B37852 'phosphotransferase system enzyme II (EC 2.7.1.69), fructose-specific - Rhodobacter capsulatus' gi|46021|emb|CAA37303.1| (X53150) fructose enzyme II [Rhodobacter capsulatus], score 537, E-value 1.00E-152. (452 aa)
CelA2Best Blastp hit = gi|11280254|pir||D82219 'PTS system, cellobiose-specific IIB component VC1281 [imported] - Vibrio cholerae (group O1 strain N16961)' gi|9655767|gb|AAF94440.1| '(AE004207) PTS system, cellobiose-specific IIB component [Vibrio cholerae]', score 70.9, E-value 4.00E-12. (108 aa)
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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