STRINGSTRING
GapA GapA GlpK GlpK TpiA TpiA Pta Pta ackA ackA PorA PorA Dak1.2 Dak1.2 Dak1 Dak1 PykF PykF Pgk Pgk
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
GapABest Blastp hit = gi|3915700|sp|P00362|G3P_BACST GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (GAPDH) gi|80204|pir||JS0164 glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - Bacillus stearothermophilus gi|142952|gb|AAA22461.1| (M24493) glyceraldehyde-3-phosphate dehydrogenase [Bacillus stearothermophilus], score 490, E-value 1.00E-137. (335 aa)
GlpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. (497 aa)
TpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (248 aa)
PtaPhosphotransacetylase; Best Blastp hit = gi|3006123|emb|CAA06174.1| (AJ004870) phosphotransacetylase [Thermoanaerobacterium thermosaccharolyticum], score 444, E-value 1.00E-124. (331 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (401 aa)
PorAPyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; Best Blastp hit = gi|4972241|emb|CAB43935.1| (Y17727) pyruvate ferredoxin oxidoreductase [Clostridium pasteurianum], score 1671, E-value 0; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family. (1173 aa)
Dak1.2Dihydroxyacetone kinase; Best Blastp hit = gi|10176020|dbj|BAB07116.1| (AP001518) dihydroxyacetone kinase [Bacillus halodurans], score 320, E-value 1.00E-86. (332 aa)
Dak1Dihydroxyacetone kinase; Best Blastp hit = gi|10186493|gb|AAG14892.1|AF297121_5 (AF297121) unknown [Selenomonas ruminantium subsp. ruminantium], score 196, E-value 2.00E-49. (212 aa)
PykFPyruvate kinase; Best Blastp hit = gi|10175785|dbj|BAB06882.1| (AP001517) pyruvate kinase [Bacillus halodurans], score 674, E-value 0; Belongs to the pyruvate kinase family. (583 aa)
Pgk3-phosphoglycerate kinase; Best Blastp hit = gi|129919|sp|P18912|PGK_BACST PHOSPHOGLYCERATE KINASE gi|80216|pir||JQ1399 phosphoglycerate kinase (EC 2.7.2.3) - Bacillus stearothermophilus gi|576239|pdb|1PHP| 3-Phosphoglycerate Kinase (Pgk) (E.C.2.7.2.3) gi|48855|emb|CAA41093.1| (X58059) 3-phosphoglycerate kinase [Bacillus stearothermophilus], score 509, E-value 1.00E-143. (394 aa)
Your Current Organism:
Caldanaerobacter subterraneus
NCBI taxonomy Id: 273068
Other names: C. subterraneus subsp. tengcongensis MB4, Caldanaerobacter subterraneus subsp. tengcongensis MB4, Thermoanaerobacter tengcongensis MB4, Thermoanaerobacter tengcongensis str. MB4, Thermoanaerobacter tengcongensis strain MB4
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