STRINGSTRING
Ta1402 Ta1402 Ta1403 Ta1403 Ta1404 Ta1404 Ta1405 Ta1405 Ta1406 Ta1406 Ta1407 Ta1407
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ta1402Weak similarity to unknown protein. (338 aa)
Ta1403Similarity to known protein: thermopsin (EC 3.4.99.43) precursor - Sulfolobus acidocaldarius; PIR:A35009. (767 aa)
Ta1404Similarity to known protein: Escherichia coli multidrug resistance (emrA) gene, complete cds; TREMBL:ECEMRA_2. (459 aa)
Ta1405Similarity to known protein: 4-HYDROXYBENZOATE TRANSPORTER - Pseudomonas putida; SWISSPROT:PCAK_PSEPU. (456 aa)
Ta1406Hypothetical membrane protein; Weak similarity to known protein. Relation: weak similarity to Galacturonic acid uptake protein exuT, Erwinia chrysanthemi, TREMBL:U86689_1. (345 aa)
Ta1407Flagellin B3 precursor related protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. (263 aa)
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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