STRINGSTRING
Ta1505 Ta1505 Ta0211 Ta0211 Ta0212 Ta0212 Ta0328 Ta0328 Ta0329 Ta0329 Ta0403 Ta0403 Ta0429 Ta0429 Ta0810 Ta0810 Ta0834 Ta0834 Ta0959 Ta0959 Ta0960 Ta0960 Ta0961 Ta0961 Ta0962 Ta0962 Ta0964 Ta0964 Ta0968 Ta0968 Ta0969 Ta0969 Ta0970 Ta0970 Ta0992 Ta0992 Ta1001 Ta1001 Ta1002 Ta1002 Ta1004 Ta1004 Ta1142 Ta1142 Ta1222 Ta1222 Ta1228 Ta1228 Ta1448 Ta1448 Ta1484 Ta1484
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ta1505Similarity to known protein: rusticyanin - Thiobacillus ferrooxidans; PIR:CUBCRT. (200 aa)
Ta0211FIXA (related to carnitine metabolism) related protein; Similarity to known protein: FIXA PROTEIN.FIXA PROTEIN - Escherichia coli.Escherichia coli; SWISSPROT:FIXA_ECOLI. (208 aa)
Ta0212Similarity to known protein: ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT (ALPHA-ETF) (ELECTRONTRANSFER FLAVOPROTEIN LARGE SUBUNIT) (ETFLS) - Clostridium acetobutylicum; SWISSPROT:ETFA_CLOAB. (293 aa)
Ta0328FIXA (related to carnitine metabolism) related protein; Similarity to known protein: FIXA PROTEIN.FIXA PROTEIN - Escherichia coli.Escherichia coli; SWISSPROT:FIXA_ECOLI. (258 aa)
Ta0329Strong similarity to known protein: ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT (ALPHA-ETF) (ELECTRONTRANSFER FLAVOPROTEIN LARGE SUBUNIT) (ETFLS) - Clostridium acetobutylicum; SWISSPROT:ETFA_CLOAB. (351 aa)
Ta0403Nife hydrogenase gamma subunit related protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). (250 aa)
Ta0429Electron transfer flavoprotein, alpha and beta subunits related protein; Similarity to known protein: ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT (ALPHA-ETF) (ELECTRONTRANSFER FLAVOPROTEIN LARGE SUBUNIT) (ETFLS) - Clostridium acetobutylicum; SWISSPROT:ETFA_CLOAB. Relation: the first part of the gene is similar to ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT, SWISSPROT:ETFB_CLOAB. (564 aa)
Ta0810Strong similarity to known protein: TUNGSTEN-CONTAINING ALDEHYDE FERREDOXIN OXIDOREDUCTASE (EC 1.2.7.-) - Pyrococcus furiosus; SWISSPROT:AOR_PYRFUFunction: involved in aldehyde oxidation. (603 aa)
Ta0834Similarity to known protein: TUNGSTEN-CONTAINING ALDEHYDE FERREDOXIN OXIDOREDUCTASE (EC 1.2.7.-) - Pyrococcus furiosus; SWISSPROT:AOR_PYRFU. (591 aa)
Ta0959NADH dehydrogenase, chain N related protein; Similarity to known protein: Arabidopsis thaliana plastid ndhB gene, exon 1 and joined CDS; TREMBL:ATAJ2490_1. (469 aa)
Ta0960Similarity to known protein: Escherichia coli NADH ubiquinone oxidoreductase subunit (nuoA) gene, complete cds; TREMBLNEW:ECNUOA_1. (503 aa)
Ta0961Similarity to known protein: NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 5 NQO12 [similarity] - Thermus aquaticus thermophilus; PIR:T11909. (635 aa)
Ta0962Probable NADH dehydrogenase, chain K; Strong similarity to known protein: NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) chain NQO11 - Thermus aquaticus thermophilus; PIR:T11908. (104 aa)
Ta0964NADH dehydrogenase, chain J related protein; Similarity to known protein: E.coli DNA sequence of nuo operon; TREMBL:ECNUOO_10Function: C-termial part of NADH dehydrogenase, chain J is missing. (82 aa)
Ta0968Similarity to known protein: NADH DEHYDROGENASE I CHAIN C (EC 1.6.5.3) (NADH-UBIQUINONEOXIDOREDUCTASE CHAIN 3) (NUO3) - Escherichia coli; SWISSPROT:NUOC_ECOLI. (150 aa)
Ta0969Probable NADH dehydrogenase, chain B; Strong similarity to known protein: NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) chain NQO6 - Thermus aquaticus thermophilus; PIR:T11899; Belongs to the complex I 20 kDa subunit family. (149 aa)
Ta0970Similarity to known protein: NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 3 - wheat chloroplast; PIR:S27251. (144 aa)
Ta0992Similarity to known protein: Bacillus stearothermophilus genes for bd-type quinol oxidase subunit I andsubunit II, complete cds; TREMBL:AB016894_1. (457 aa)
Ta1001Probable fumarate reductase (frdA); Strong similarity to known protein: S.acidocaldarius sdhA, sdhB, sdhC and sdhD genes; TREMBL:SASDHABCD_2. (567 aa)
Ta1002Probable fumarate reductase, subunit B; Strong similarity to known protein: FUMARATE REDUCTASE IRON-SULFUR PROTEIN (EC 1.3.99.1) - Proteus vulgaris; SWISSPROT:FRDB_PROVU. (240 aa)
Ta1004Succinate dehydrogenase, subunit D; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (123 aa)
Ta1142Similarity to known protein: TUNGSTEN-CONTAINING ALDEHYDE FERREDOXIN OXIDOREDUCTASE (EC 1.2.7.-) - Pyrococcus furiosus; SWISSPROT:AOR_PYRFU. (623 aa)
Ta1222Similarity to known protein: cytochrome b6 homolog soxC [similarity] - Sulfolobus acidocaldarius; PIR:S21043. Relation: short C-terminus like eukaryotic cytochromes. (404 aa)
Ta1228Similarity to known protein: cytochrome b6 homolog soxC [similarity] - Sulfolobus acidocaldarius; PIR:S21043. (525 aa)
Ta1448Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (143 aa)
Ta1484Similarity to known protein: Bacillus stearothermophilus genes for bd-type quinol oxidase subunit I andsubunit II, complete cds; TREMBL:AB016894_1. (431 aa)
Your Current Organism:
Thermoplasma acidophilum
NCBI taxonomy Id: 273075
Other names: T. acidophilum DSM 1728, Thermoplasma acidophilum DSM 1728
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