(4 nodes) Proton-transporting V-type ATPase complex network (Thermoplasma volcanium)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVG0056269	H+-transporting ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (209 aa)
	TVG0051618	V-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane. (356 aa)
	TVG0346559	Hypothetical protein. (225 aa)
	TVG0058686	H+-transporting ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family. (643 aa)

Your Current Organism:

Thermoplasma volcanium

NCBI taxonomy Id: 273116
Other names: T. volcanium GSS1, Thermoplasma volcanium GSS1, Thermoplasma volcanium str. GSS1, Thermoplasma volcanium strain GSS1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TVG0051618	TVG0056269	gene:9380814	gene:9380818	V-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.	H+-transporting ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
TVG0051618	TVG0058686	gene:9380814	gene:9380820	V-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.	H+-transporting ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	0.999
TVG0051618	TVG0346559	gene:9380814	gene:9381131	V-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Hypothetical protein.	0.454
TVG0056269	TVG0051618	gene:9380818	gene:9380814	H+-transporting ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	V-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
TVG0056269	TVG0058686	gene:9380818	gene:9380820	H+-transporting ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	H+-transporting ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	0.999
TVG0058686	TVG0051618	gene:9380820	gene:9380814	H+-transporting ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
TVG0058686	TVG0056269	gene:9380820	gene:9380818	H+-transporting ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	H+-transporting ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
TVG0346559	TVG0051618	gene:9381131	gene:9380814	Hypothetical protein.	V-type ATP synthase subunit C; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.454