(4 nodes) Nickel cation transmembrane transport network (Wolinella succinogenes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WS0271	Hypothetical protein; Belongs to the NiCoT transporter (TC 2.A.52) family. (475 aa)
	NIKB	NICKEL TRANSPORT SYSTEM PERMEASE. (312 aa)
	WS0986	OLIGOPEPTIDE ABC TRANSPORTER PERMEASE. (274 aa)
	OPP-1D-2	OLIGOPEPTIDE TRANSPORTER PUTATIVE ATPASE DOMAIN. (273 aa)

Your Current Organism:

Wolinella succinogenes

NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NIKB	OPP-1D-2	WS0985	WS0987	NICKEL TRANSPORT SYSTEM PERMEASE.	OLIGOPEPTIDE TRANSPORTER PUTATIVE ATPASE DOMAIN.	0.998
NIKB	WS0986	WS0985	WS0986	NICKEL TRANSPORT SYSTEM PERMEASE.	OLIGOPEPTIDE ABC TRANSPORTER PERMEASE.	0.999
OPP-1D-2	NIKB	WS0987	WS0985	OLIGOPEPTIDE TRANSPORTER PUTATIVE ATPASE DOMAIN.	NICKEL TRANSPORT SYSTEM PERMEASE.	0.998
OPP-1D-2	WS0986	WS0987	WS0986	OLIGOPEPTIDE TRANSPORTER PUTATIVE ATPASE DOMAIN.	OLIGOPEPTIDE ABC TRANSPORTER PERMEASE.	0.999
WS0986	NIKB	WS0986	WS0985	OLIGOPEPTIDE ABC TRANSPORTER PERMEASE.	NICKEL TRANSPORT SYSTEM PERMEASE.	0.999
WS0986	OPP-1D-2	WS0986	WS0987	OLIGOPEPTIDE ABC TRANSPORTER PERMEASE.	OLIGOPEPTIDE TRANSPORTER PUTATIVE ATPASE DOMAIN.	0.999