11 items (Wolinella succinogenes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WS1673	SIGNAL-TRANSDUCTION SENSOR PROTEIN-PAS/PAC domain. (169 aa)
	WS0212	HYBRID SENSORY HISTIDINE KINASE. (538 aa)
	RHPS-2	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM. (789 aa)
	WS0696	PUTATIVE SIGNAL-TRANSDUCTION SENSOR PROTEIN. (167 aa)
	WS0964	HYPOTHETICAL 92.5 KDA PROTEIN. (804 aa)
	DGC3	DIGUANYLATE CYCLASE FRAGMENT. (493 aa)
	WS1205	SENSORY BOX/GGDEF FAMILY PROTEIN. (583 aa)
	DGC3-2	DIGUANYLATE CYCLASE FRAGMENT. (389 aa)
	WS1328	PUTATIVE TWO-COMPONENT SENSOR. (1098 aa)
	WS1338	PUTATIVE SIGNAL-TRANSDUCTION SENSOR PROTEIN. (167 aa)
	WS2025	PUTATIVE SIGNAL-TRANSDUCTION SENSOR PROTEIN. (174 aa)

Your Current Organism:

Wolinella succinogenes

NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DGC3	DGC3-2	WS1021	WS1304	DIGUANYLATE CYCLASE FRAGMENT.	DIGUANYLATE CYCLASE FRAGMENT.	0.526
DGC3	WS0964	WS1021	WS0964	DIGUANYLATE CYCLASE FRAGMENT.	HYPOTHETICAL 92.5 KDA PROTEIN.	0.745
DGC3	WS1205	WS1021	WS1205	DIGUANYLATE CYCLASE FRAGMENT.	SENSORY BOX/GGDEF FAMILY PROTEIN.	0.420
DGC3	WS1328	WS1021	WS1328	DIGUANYLATE CYCLASE FRAGMENT.	PUTATIVE TWO-COMPONENT SENSOR.	0.757
DGC3-2	DGC3	WS1304	WS1021	DIGUANYLATE CYCLASE FRAGMENT.	DIGUANYLATE CYCLASE FRAGMENT.	0.526
DGC3-2	RHPS-2	WS1304	WS0415	DIGUANYLATE CYCLASE FRAGMENT.	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM.	0.811
DGC3-2	WS0212	WS1304	WS0212	DIGUANYLATE CYCLASE FRAGMENT.	HYBRID SENSORY HISTIDINE KINASE.	0.478
DGC3-2	WS1328	WS1304	WS1328	DIGUANYLATE CYCLASE FRAGMENT.	PUTATIVE TWO-COMPONENT SENSOR.	0.708
RHPS-2	DGC3-2	WS0415	WS1304	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM.	DIGUANYLATE CYCLASE FRAGMENT.	0.811
RHPS-2	WS0212	WS0415	WS0212	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM.	HYBRID SENSORY HISTIDINE KINASE.	0.661
RHPS-2	WS1328	WS0415	WS1328	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM.	PUTATIVE TWO-COMPONENT SENSOR.	0.550
WS0212	DGC3-2	WS0212	WS1304	HYBRID SENSORY HISTIDINE KINASE.	DIGUANYLATE CYCLASE FRAGMENT.	0.478
WS0212	RHPS-2	WS0212	WS0415	HYBRID SENSORY HISTIDINE KINASE.	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM.	0.661
WS0212	WS0964	WS0212	WS0964	HYBRID SENSORY HISTIDINE KINASE.	HYPOTHETICAL 92.5 KDA PROTEIN.	0.401
WS0212	WS1328	WS0212	WS1328	HYBRID SENSORY HISTIDINE KINASE.	PUTATIVE TWO-COMPONENT SENSOR.	0.613
WS0964	DGC3	WS0964	WS1021	HYPOTHETICAL 92.5 KDA PROTEIN.	DIGUANYLATE CYCLASE FRAGMENT.	0.745
WS0964	WS0212	WS0964	WS0212	HYPOTHETICAL 92.5 KDA PROTEIN.	HYBRID SENSORY HISTIDINE KINASE.	0.401
WS1205	DGC3	WS1205	WS1021	SENSORY BOX/GGDEF FAMILY PROTEIN.	DIGUANYLATE CYCLASE FRAGMENT.	0.420
WS1328	DGC3	WS1328	WS1021	PUTATIVE TWO-COMPONENT SENSOR.	DIGUANYLATE CYCLASE FRAGMENT.	0.757
WS1328	DGC3-2	WS1328	WS1304	PUTATIVE TWO-COMPONENT SENSOR.	DIGUANYLATE CYCLASE FRAGMENT.	0.708