21 items (Wolinella succinogenes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WS0108	GGDEF FAMILY PROTEIN. (698 aa)
	RHPS	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM. (390 aa)
	WS0212	HYBRID SENSORY HISTIDINE KINASE. (538 aa)
	WS0414	HYPOTHETICAL 53.4 KDA PROTEIN. (431 aa)
	RHPS-2	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM. (789 aa)
	RHPS-3	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM. (739 aa)
	WS0696	PUTATIVE SIGNAL-TRANSDUCTION SENSOR PROTEIN. (167 aa)
	NIFL	NITROGEN FIXATION POSITIVE ACTIVATOR PROTEIN. (845 aa)
	WS0940	HYPOTHETICAL 81.9 KDA PROTEIN. (713 aa)
	WS0964	HYPOTHETICAL 92.5 KDA PROTEIN. (804 aa)
	cheA	TWO-COMPONENT HYBRID HISTIDINE KINASE. (1019 aa)
	DGC3	DIGUANYLATE CYCLASE FRAGMENT. (493 aa)
	WS1205	SENSORY BOX/GGDEF FAMILY PROTEIN. (583 aa)
	DGC3-2	DIGUANYLATE CYCLASE FRAGMENT. (389 aa)
	WS1328	PUTATIVE TWO-COMPONENT SENSOR. (1098 aa)
	WS1338	PUTATIVE SIGNAL-TRANSDUCTION SENSOR PROTEIN. (167 aa)
	WS1340	PUTATIVE TWO-COMPONENT SENSOR. (590 aa)
	DGC2	DIGUANYLATE CYCLASE. (541 aa)
	WS1673	SIGNAL-TRANSDUCTION SENSOR PROTEIN-PAS/PAC domain. (169 aa)
	RHPS-4	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM. (765 aa)
	WS1981	Sensor kinase of two-component regulatory system. (645 aa)

Your Current Organism:

Wolinella succinogenes

NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DGC2	DGC3	WS1556	WS1021	DIGUANYLATE CYCLASE.	DIGUANYLATE CYCLASE FRAGMENT.	0.756
DGC2	DGC3-2	WS1556	WS1304	DIGUANYLATE CYCLASE.	DIGUANYLATE CYCLASE FRAGMENT.	0.548
DGC2	NIFL	WS1556	WS0775	DIGUANYLATE CYCLASE.	NITROGEN FIXATION POSITIVE ACTIVATOR PROTEIN.	0.910
DGC2	RHPS-2	WS1556	WS0415	DIGUANYLATE CYCLASE.	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM.	0.566
DGC2	RHPS-4	WS1556	WS1861	DIGUANYLATE CYCLASE.	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM.	0.614
DGC2	WS0108	WS1556	WS0108	DIGUANYLATE CYCLASE.	GGDEF FAMILY PROTEIN.	0.932
DGC2	WS0212	WS1556	WS0212	DIGUANYLATE CYCLASE.	HYBRID SENSORY HISTIDINE KINASE.	0.523
DGC2	WS0414	WS1556	WS0414	DIGUANYLATE CYCLASE.	HYPOTHETICAL 53.4 KDA PROTEIN.	0.865
DGC2	WS0940	WS1556	WS0940	DIGUANYLATE CYCLASE.	HYPOTHETICAL 81.9 KDA PROTEIN.	0.912
DGC2	WS0964	WS1556	WS0964	DIGUANYLATE CYCLASE.	HYPOTHETICAL 92.5 KDA PROTEIN.	0.619
DGC2	WS1205	WS1556	WS1205	DIGUANYLATE CYCLASE.	SENSORY BOX/GGDEF FAMILY PROTEIN.	0.578
DGC2	WS1328	WS1556	WS1328	DIGUANYLATE CYCLASE.	PUTATIVE TWO-COMPONENT SENSOR.	0.685
DGC2	WS1981	WS1556	WS1981	DIGUANYLATE CYCLASE.	Sensor kinase of two-component regulatory system.	0.770
DGC2	cheA	WS1556	WS0975	DIGUANYLATE CYCLASE.	TWO-COMPONENT HYBRID HISTIDINE KINASE.	0.958
DGC3	DGC2	WS1021	WS1556	DIGUANYLATE CYCLASE FRAGMENT.	DIGUANYLATE CYCLASE.	0.756
DGC3	DGC3-2	WS1021	WS1304	DIGUANYLATE CYCLASE FRAGMENT.	DIGUANYLATE CYCLASE FRAGMENT.	0.526
DGC3	NIFL	WS1021	WS0775	DIGUANYLATE CYCLASE FRAGMENT.	NITROGEN FIXATION POSITIVE ACTIVATOR PROTEIN.	0.776
DGC3	RHPS	WS1021	WS0120	DIGUANYLATE CYCLASE FRAGMENT.	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM.	0.416
DGC3	RHPS-3	WS1021	WS0658	DIGUANYLATE CYCLASE FRAGMENT.	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM.	0.414
DGC3	RHPS-4	WS1021	WS1861	DIGUANYLATE CYCLASE FRAGMENT.	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM.	0.702