55 items (Wolinella succinogenes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WS1033	Hypothetical protein. (231 aa)
	WS0011	PUTATIVE TWO-COMPONENT REGULATOR. (220 aa)
	RHPR	RESPONSE REGULATOR OF TWO-COMPONENT REGULATORY SYSTEM. (219 aa)
	WS0077	PUTATIVE TWO-COMPONENT REGULATOR. (222 aa)
	WS0108	GGDEF FAMILY PROTEIN. (698 aa)
	RHPR-2	RESPONSE REGULATOR OF TWO-COMPONENT REGULATORY SYSTEM. (223 aa)
	WS0212	HYBRID SENSORY HISTIDINE KINASE. (538 aa)
	WS0213	PUTATIVE TWO-COMPONENT REGULATOR. (219 aa)
	WS0214	PUTATIVE TWO-COMPONENT REGULATOR. (187 aa)
	CHEV_1	PUTATIVE CHEMOTAXIS PROTEIN. (318 aa)
	WS0306	TWO-COMPONENT REGULATOR. (223 aa)
	WS0344	GGDEF DOMAIN PROTEIN; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM. (436 aa)
	WS0367	SIGNAL-TRANSDUCTION REGULATORY PROTEIN. (437 aa)
	WS0376	PUTATIVE TWO-COMPONENT REGULATOR. (170 aa)
	WS0414	HYPOTHETICAL 53.4 KDA PROTEIN. (431 aa)
	RHPS-2	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM. (789 aa)
	CHEY	CHEY RESPONSE REGULATOR CHEY. (125 aa)
	WS0641	TRANSCRIPTIONAL ACTIVATOR PROTEIN COPR. (224 aa)
	RHPR-3	RESPONSE REGULATOR OF TWO-COMPONENT REGULATORY SYSTEM. (219 aa)
	WS0693	PROBABLE TWO-COMPONENT RESPONSE REGULATOR. (330 aa)
	WS0849	TWO-COMPONENT HYBRID SENSOR AND REGULATOR. (379 aa)
	WS0850	SENSORY TRANSDUCTION HISTIDINE KINASE. (1555 aa)
	WS0852	TWO-COMPONENT HYBRID SENSOR AND REGULATOR. (372 aa)
	WS0853	PUTATIVE TWO-COMPONENT REGULATOR. (224 aa)
	WS0900	PUTATIVE TWO-COMPONENT REGULATOR. (219 aa)
	WS0934	PUTATIVE TWO-COMPONENT REGULATOR. (230 aa)
	WS0950	PUTATIVE SENSORY TRANSDUCTION TRANSCRIPTIONAL REGULATOR. (224 aa)
	WS0974	TWO-COMPONENT HYBRID SENSOR AND REGULATOR. (401 aa)
	cheA	TWO-COMPONENT HYBRID HISTIDINE KINASE. (1019 aa)
	DGC3	DIGUANYLATE CYCLASE FRAGMENT. (493 aa)
	WS1077	PUTATIVE TWO-COMPONENT RESPONSE REGULATOR. (131 aa)
	RHPR-4	RESPONSE REGULATOR OF TWO-COMPONENT REGULATORY SYSTEM. (216 aa)
	DGC3-2	DIGUANYLATE CYCLASE FRAGMENT. (389 aa)
	WS1339	Hypothetical protein. (377 aa)
	WS1375	TWO-COMPONENT HYBRID SENSOR AND REGULATOR. (509 aa)
	CHEY-2	CHEY AND CHEB GENES CHEMOTAXIS PROTEIN. (434 aa)
	WS1434	PUTATIVE TWO-COMPONENT REGULATOR. (227 aa)
	WS1463	PUTATIVE TWO-COMPONENT REGULATOR. (216 aa)
	WS1523	RESPONSE REGULATOR OMPR-CheY-like and winged-helix DNA-binding domain. (235 aa)
	WS1726	SIGNAL TRANSDUCTION RESPONSE REGULATOR. (349 aa)
	WS1727	SENSOR/RESPONSE REGULATOR HYBRID. (1263 aa)
	CHEV_1-2	CHEMOTAXIS PROTEIN. (331 aa)
	WS1798	TWO-COMPONENT RESPONSE REGULATOR. (215 aa)
	WS1817	RESPONSE REGULATOR OMPR. (261 aa)
	WS1869	CHEMOTAXIS PROTEIN CHEV-CheY like receiver domain. (314 aa)
	WS1918	Hypothetical protein. (480 aa)
	WS1939	PUTATIVE TWO-COMPONENT REGULATOR-CheY like receiver domain. (297 aa)
	WS1954	SIGNAL TRANSDUCTION REGULATORY PROTEIN-CheY like receiver domain. (232 aa)
	WS1981	Sensor kinase of two-component regulatory system. (645 aa)
	WS2047	PUTATIVE TWO-COMPONENT REGULATOR. (233 aa)
	CHEA-2	HISTIDINE KINASE. (801 aa)
	CHEV	CHEMOTAXIS PROTEIN EC 2.7.3. (316 aa)
	WS2088	PUTATIVE TWO-COMPONENT REGULATOR. (220 aa)
	WS2113	Hypothetical protein; Putative two-component regulator. (573 aa)
	WS2201	TRANSCRIPTIONAL REGULATOR PHOB-LIKE. (218 aa)

Your Current Organism:

Wolinella succinogenes

NCBI taxonomy Id: 273121
Other names: W. succinogenes DSM 1740, Wolinella succinogenes DSM 1740

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHEA-2	CHEV	WS2083	WS2084	HISTIDINE KINASE.	CHEMOTAXIS PROTEIN EC 2.7.3.	0.999
CHEA-2	CHEV_1	WS2083	WS0257	HISTIDINE KINASE.	PUTATIVE CHEMOTAXIS PROTEIN.	0.999
CHEA-2	CHEV_1-2	WS2083	WS1787	HISTIDINE KINASE.	CHEMOTAXIS PROTEIN.	0.999
CHEA-2	CHEY	WS2083	WS0619	HISTIDINE KINASE.	CHEY RESPONSE REGULATOR CHEY.	0.943
CHEA-2	CHEY-2	WS2083	WS1376	HISTIDINE KINASE.	CHEY AND CHEB GENES CHEMOTAXIS PROTEIN.	0.604
CHEA-2	DGC3	WS2083	WS1021	HISTIDINE KINASE.	DIGUANYLATE CYCLASE FRAGMENT.	0.845
CHEA-2	DGC3-2	WS2083	WS1304	HISTIDINE KINASE.	DIGUANYLATE CYCLASE FRAGMENT.	0.932
CHEA-2	RHPS-2	WS2083	WS0415	HISTIDINE KINASE.	SENSOR KINASE OF TWO-COMPONENT REGULATORY SYSTEM.	0.860
CHEA-2	WS0108	WS2083	WS0108	HISTIDINE KINASE.	GGDEF FAMILY PROTEIN.	0.969
CHEA-2	WS0212	WS2083	WS0212	HISTIDINE KINASE.	HYBRID SENSORY HISTIDINE KINASE.	0.911
CHEA-2	WS0213	WS2083	WS0213	HISTIDINE KINASE.	PUTATIVE TWO-COMPONENT REGULATOR.	0.477
CHEA-2	WS0214	WS2083	WS0214	HISTIDINE KINASE.	PUTATIVE TWO-COMPONENT REGULATOR.	0.986
CHEA-2	WS0344	WS2083	WS0344	HISTIDINE KINASE.	GGDEF DOMAIN PROTEIN; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM.	0.668
CHEA-2	WS0367	WS2083	WS0367	HISTIDINE KINASE.	SIGNAL-TRANSDUCTION REGULATORY PROTEIN.	0.776
CHEA-2	WS0376	WS2083	WS0376	HISTIDINE KINASE.	PUTATIVE TWO-COMPONENT REGULATOR.	0.428
CHEA-2	WS0414	WS2083	WS0414	HISTIDINE KINASE.	HYPOTHETICAL 53.4 KDA PROTEIN.	0.942
CHEA-2	WS0693	WS2083	WS0693	HISTIDINE KINASE.	PROBABLE TWO-COMPONENT RESPONSE REGULATOR.	0.796
CHEA-2	WS0849	WS2083	WS0849	HISTIDINE KINASE.	TWO-COMPONENT HYBRID SENSOR AND REGULATOR.	0.894
CHEA-2	WS0850	WS2083	WS0850	HISTIDINE KINASE.	SENSORY TRANSDUCTION HISTIDINE KINASE.	0.943
CHEA-2	WS0852	WS2083	WS0852	HISTIDINE KINASE.	TWO-COMPONENT HYBRID SENSOR AND REGULATOR.	0.894