5 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_020620	Histone H4 acetyltransferase, NuA4 complex, Eaf6. (230 aa)
	PEX2_031810	Uncharacterized protein. (248 aa)
	PEX2_057220	Myb-like domain-containing protein. (562 aa)
	PEX2_025990	Enhancer of polycomb-like protein. (568 aa)
	PEX2_061870	Chromatin modification-related protein EAF7. (290 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_020620	PEX2_025990	A0A0A2ILW5	A0A0A2K6D9	Histone H4 acetyltransferase, NuA4 complex, Eaf6.	Enhancer of polycomb-like protein.	0.992
PEX2_020620	PEX2_031810	A0A0A2ILW5	A0A0A2J4D0	Histone H4 acetyltransferase, NuA4 complex, Eaf6.	Uncharacterized protein.	0.980
PEX2_020620	PEX2_057220	A0A0A2ILW5	A0A0A2JCJ4	Histone H4 acetyltransferase, NuA4 complex, Eaf6.	Myb-like domain-containing protein.	0.988
PEX2_020620	PEX2_061870	A0A0A2ILW5	A0A0A2KNG0	Histone H4 acetyltransferase, NuA4 complex, Eaf6.	Chromatin modification-related protein EAF7.	0.986
PEX2_025990	PEX2_020620	A0A0A2K6D9	A0A0A2ILW5	Enhancer of polycomb-like protein.	Histone H4 acetyltransferase, NuA4 complex, Eaf6.	0.992
PEX2_025990	PEX2_031810	A0A0A2K6D9	A0A0A2J4D0	Enhancer of polycomb-like protein.	Uncharacterized protein.	0.981
PEX2_025990	PEX2_057220	A0A0A2K6D9	A0A0A2JCJ4	Enhancer of polycomb-like protein.	Myb-like domain-containing protein.	0.994
PEX2_025990	PEX2_061870	A0A0A2K6D9	A0A0A2KNG0	Enhancer of polycomb-like protein.	Chromatin modification-related protein EAF7.	0.987
PEX2_031810	PEX2_020620	A0A0A2J4D0	A0A0A2ILW5	Uncharacterized protein.	Histone H4 acetyltransferase, NuA4 complex, Eaf6.	0.980
PEX2_031810	PEX2_025990	A0A0A2J4D0	A0A0A2K6D9	Uncharacterized protein.	Enhancer of polycomb-like protein.	0.981
PEX2_031810	PEX2_057220	A0A0A2J4D0	A0A0A2JCJ4	Uncharacterized protein.	Myb-like domain-containing protein.	0.987
PEX2_031810	PEX2_061870	A0A0A2J4D0	A0A0A2KNG0	Uncharacterized protein.	Chromatin modification-related protein EAF7.	0.953
PEX2_057220	PEX2_020620	A0A0A2JCJ4	A0A0A2ILW5	Myb-like domain-containing protein.	Histone H4 acetyltransferase, NuA4 complex, Eaf6.	0.988
PEX2_057220	PEX2_025990	A0A0A2JCJ4	A0A0A2K6D9	Myb-like domain-containing protein.	Enhancer of polycomb-like protein.	0.994
PEX2_057220	PEX2_031810	A0A0A2JCJ4	A0A0A2J4D0	Myb-like domain-containing protein.	Uncharacterized protein.	0.987
PEX2_057220	PEX2_061870	A0A0A2JCJ4	A0A0A2KNG0	Myb-like domain-containing protein.	Chromatin modification-related protein EAF7.	0.989
PEX2_061870	PEX2_020620	A0A0A2KNG0	A0A0A2ILW5	Chromatin modification-related protein EAF7.	Histone H4 acetyltransferase, NuA4 complex, Eaf6.	0.986
PEX2_061870	PEX2_025990	A0A0A2KNG0	A0A0A2K6D9	Chromatin modification-related protein EAF7.	Enhancer of polycomb-like protein.	0.987
PEX2_061870	PEX2_031810	A0A0A2KNG0	A0A0A2J4D0	Chromatin modification-related protein EAF7.	Uncharacterized protein.	0.953
PEX2_061870	PEX2_057220	A0A0A2KNG0	A0A0A2JCJ4	Chromatin modification-related protein EAF7.	Myb-like domain-containing protein.	0.989