5 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_081070	Uncharacterized protein. (82 aa)
	PEX2_051460	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation. (1209 aa)
	PEX2_005640	WD_REPEATS_REGION domain-containing protein. (478 aa)
	PEX2_051690	Concanavalin A-like lectin/glucanases superfamily. (596 aa)
	PEX2_082610	WD_REPEATS_REGION domain-containing protein. (517 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_005640	PEX2_051460	A0A0A2IAI8	A0A0A2I9Q7	WD_REPEATS_REGION domain-containing protein.	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.	0.997
PEX2_005640	PEX2_051690	A0A0A2IAI8	A0A0A2IV45	WD_REPEATS_REGION domain-containing protein.	Concanavalin A-like lectin/glucanases superfamily.	0.999
PEX2_005640	PEX2_081070	A0A0A2IAI8	A0A0A2I9N7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.997
PEX2_005640	PEX2_082610	A0A0A2IAI8	A0A0A2KBK5	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.996
PEX2_051460	PEX2_005640	A0A0A2I9Q7	A0A0A2IAI8	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.	WD_REPEATS_REGION domain-containing protein.	0.997
PEX2_051460	PEX2_051690	A0A0A2I9Q7	A0A0A2IV45	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.	Concanavalin A-like lectin/glucanases superfamily.	0.997
PEX2_051460	PEX2_081070	A0A0A2I9Q7	A0A0A2I9N7	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.	Uncharacterized protein.	0.980
PEX2_051460	PEX2_082610	A0A0A2I9Q7	A0A0A2KBK5	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.	WD_REPEATS_REGION domain-containing protein.	0.992
PEX2_051690	PEX2_005640	A0A0A2IV45	A0A0A2IAI8	Concanavalin A-like lectin/glucanases superfamily.	WD_REPEATS_REGION domain-containing protein.	0.999
PEX2_051690	PEX2_051460	A0A0A2IV45	A0A0A2I9Q7	Concanavalin A-like lectin/glucanases superfamily.	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.	0.997
PEX2_051690	PEX2_081070	A0A0A2IV45	A0A0A2I9N7	Concanavalin A-like lectin/glucanases superfamily.	Uncharacterized protein.	0.997
PEX2_051690	PEX2_082610	A0A0A2IV45	A0A0A2KBK5	Concanavalin A-like lectin/glucanases superfamily.	WD_REPEATS_REGION domain-containing protein.	0.989
PEX2_081070	PEX2_005640	A0A0A2I9N7	A0A0A2IAI8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.997
PEX2_081070	PEX2_051460	A0A0A2I9N7	A0A0A2I9Q7	Uncharacterized protein.	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.	0.980
PEX2_081070	PEX2_051690	A0A0A2I9N7	A0A0A2IV45	Uncharacterized protein.	Concanavalin A-like lectin/glucanases superfamily.	0.997
PEX2_081070	PEX2_082610	A0A0A2I9N7	A0A0A2KBK5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.960
PEX2_082610	PEX2_005640	A0A0A2KBK5	A0A0A2IAI8	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.996
PEX2_082610	PEX2_051460	A0A0A2KBK5	A0A0A2I9Q7	WD_REPEATS_REGION domain-containing protein.	Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.	0.992
PEX2_082610	PEX2_051690	A0A0A2KBK5	A0A0A2IV45	WD_REPEATS_REGION domain-containing protein.	Concanavalin A-like lectin/glucanases superfamily.	0.989
PEX2_082610	PEX2_081070	A0A0A2KBK5	A0A0A2I9N7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.960