STRINGSTRING
PEX2_093480 PEX2_093480 PEX2_009270 PEX2_009270 PEX2_019430 PEX2_019430 PEX2_102570 PEX2_102570 PEX2_046730 PEX2_046730 PEX2_018910 PEX2_018910 PEX2_088750 PEX2_088750 PEX2_020830 PEX2_020830 PEX2_001490 PEX2_001490 PEX2_060160 PEX2_060160 PEX2_037470 PEX2_037470 PEX2_062890 PEX2_062890 PEX2_003060 PEX2_003060 PEX2_030690 PEX2_030690 PEX2_094120 PEX2_094120 PEX2_081010 PEX2_081010 PEX2_085190 PEX2_085190 PEX2_023540 PEX2_023540 PEX2_038860 PEX2_038860 PEX2_096650 PEX2_096650 PEX2_026180 PEX2_026180 PEX2_069980 PEX2_069980 PEX2_037480 PEX2_037480 PEX2_103510 PEX2_103510 PEX2_005630 PEX2_005630
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PEX2_093480DNA-directed RNA polymerase, dimerization. (335 aa)
PEX2_009270RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (816 aa)
PEX2_019430Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1411 aa)
PEX2_102570Tetratricopeptide TPR2. (1195 aa)
PEX2_046730DNA-directed RNA polymerase, M/15kDa subunit. (136 aa)
PEX2_018910RNA polymerase II-associated, Paf1. (486 aa)
PEX2_088750DNA-directed RNA polymerase, subunit N/Rpb10. (74 aa)
PEX2_020830RNA polymerase II, Rpb4, core. (148 aa)
PEX2_001490RNA polymerase II accessory factor, Cdc73. (474 aa)
PEX2_060160Transcription factor IIS, N-terminal. (442 aa)
PEX2_037470Histone H2B; Belongs to the histone H2B family. (141 aa)
PEX2_062890Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1025 aa)
PEX2_003060Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
PEX2_030690Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type. (466 aa)
PEX2_094120Uncharacterized protein. (1021 aa)
PEX2_081010FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (577 aa)
PEX2_085190Plus-3. (611 aa)
PEX2_023540DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)
PEX2_038860Nucleic acid-binding, OB-fold. (169 aa)
PEX2_096650Leo1-like protein. (434 aa)
PEX2_026180Histone-fold. (168 aa)
PEX2_069980Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (120 aa)
PEX2_037480Histone H2A; Belongs to the histone H2A family. (132 aa)
PEX2_103510RNA polymerase archaeal subunit P/eukaryotic subunit RPC10. (78 aa)
PEX2_005630DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1738 aa)
Your Current Organism:
Penicillium expansum
NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum
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