11 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

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protein homology

Your Input:
	PEX2_013900	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (125 aa)
	PEX2_033070	Small nuclear ribonucleoprotein SmF. (88 aa)
	PEX2_105290	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (226 aa)
	PEX2_038120	Small nuclear ribonucleoprotein G. (118 aa)
	PEX2_074030	MIF4-like, type 1/2/3. (822 aa)
	PEX2_075830	Small nuclear ribonucleoprotein Sm D2. (117 aa)
	PEX2_034650	Sm domain-containing protein. (211 aa)
	PEX2_102220	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (87 aa)
	PEX2_046780	Nuclear cap-binding protein subunit 2. (190 aa)
	PEX2_033590	RRM domain-containing protein. (424 aa)
	PEX2_064640	Small nuclear ribonucleoprotein Sm D3. (117 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_013900	PEX2_033070	A0A0A2I761	A0A0A2IMX5	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein SmF.	0.999
PEX2_013900	PEX2_033590	A0A0A2I761	A0A0A2KPC9	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	RRM domain-containing protein.	0.996
PEX2_013900	PEX2_034650	A0A0A2I761	A0A0A2JXU2	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Sm domain-containing protein.	0.994
PEX2_013900	PEX2_038120	A0A0A2I761	A0A0A2JG18	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein G.	0.999
PEX2_013900	PEX2_046780	A0A0A2I761	A0A0A2K4M9	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Nuclear cap-binding protein subunit 2.	0.985
PEX2_013900	PEX2_064640	A0A0A2I761	A0A0A2KY01	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D3.	0.999
PEX2_013900	PEX2_074030	A0A0A2I761	A0A0A2JUZ3	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	MIF4-like, type 1/2/3.	0.979
PEX2_013900	PEX2_075830	A0A0A2I761	A0A0A2JWS1	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein Sm D2.	0.999
PEX2_013900	PEX2_102220	A0A0A2I761	A0A0A2K2P4	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
PEX2_013900	PEX2_105290	A0A0A2I761	A0A0A2J0M7	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.994
PEX2_033070	PEX2_013900	A0A0A2IMX5	A0A0A2I761	Small nuclear ribonucleoprotein SmF.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
PEX2_033070	PEX2_033590	A0A0A2IMX5	A0A0A2KPC9	Small nuclear ribonucleoprotein SmF.	RRM domain-containing protein.	0.973
PEX2_033070	PEX2_034650	A0A0A2IMX5	A0A0A2JXU2	Small nuclear ribonucleoprotein SmF.	Sm domain-containing protein.	0.987
PEX2_033070	PEX2_038120	A0A0A2IMX5	A0A0A2JG18	Small nuclear ribonucleoprotein SmF.	Small nuclear ribonucleoprotein G.	0.999
PEX2_033070	PEX2_046780	A0A0A2IMX5	A0A0A2K4M9	Small nuclear ribonucleoprotein SmF.	Nuclear cap-binding protein subunit 2.	0.989
PEX2_033070	PEX2_064640	A0A0A2IMX5	A0A0A2KY01	Small nuclear ribonucleoprotein SmF.	Small nuclear ribonucleoprotein Sm D3.	0.998
PEX2_033070	PEX2_074030	A0A0A2IMX5	A0A0A2JUZ3	Small nuclear ribonucleoprotein SmF.	MIF4-like, type 1/2/3.	0.964
PEX2_033070	PEX2_075830	A0A0A2IMX5	A0A0A2JWS1	Small nuclear ribonucleoprotein SmF.	Small nuclear ribonucleoprotein Sm D2.	0.999
PEX2_033070	PEX2_102220	A0A0A2IMX5	A0A0A2K2P4	Small nuclear ribonucleoprotein SmF.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
PEX2_033070	PEX2_105290	A0A0A2IMX5	A0A0A2J0M7	Small nuclear ribonucleoprotein SmF.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.986