44 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_034010	PSP domain-containing protein. (559 aa)
	PEX2_092630	LUC7-like protein. (289 aa)
	PEX2_084010	Uncharacterized protein. (385 aa)
	PEX2_079600	Protein kinase domain-containing protein. (577 aa)
	PEX2_036690	WD_REPEATS_REGION domain-containing protein. (582 aa)
	PEX2_081030	RNA recognition motif domain, eukaryote. (600 aa)
	PEX2_107360	Uncharacterized protein. (163 aa)
	PEX2_005880	Tetratricopeptide-like helical. (555 aa)
	PEX2_029950	Protein kinase domain-containing protein. (295 aa)
	PEX2_086060	Glutathione S-transferase, C-terminal. (264 aa)
	PEX2_109370	NmrA domain-containing protein. (305 aa)
	PEX2_099160	RNA-processing protein, HAT helix. (614 aa)
	PEX2_073230	Protein kinase domain-containing protein. (463 aa)
	PEX2_064090	GST N-terminal domain-containing protein. (241 aa)
	PEX2_023410	Tetratricopeptide-like helical. (578 aa)
	PEX2_063170	Glutathione S-transferase, N-terminal. (243 aa)
	PEX2_042130	Uncharacterized protein. (108 aa)
	PEX2_101420	RNA-processing protein, HAT helix. (673 aa)
	PEX2_033170	Uncharacterized protein. (1602 aa)
	PEX2_072680	Nucleotide-binding, alpha-beta plait. (276 aa)
	PEX2_103640	Zinc finger, U1-type. (235 aa)
	PEX2_005970	Protein kinase domain-containing protein. (425 aa)
	PEX2_069140	F-box domain-containing protein. (659 aa)
	PEX2_003270	Splicing factor 3B subunit 1. (1210 aa)
	PEX2_106550	JAB_MPN domain-containing protein. (2516 aa)
	PEX2_062330	NmrA domain-containing protein. (293 aa)
	PEX2_101470	Hemopexin/matrixin. (197 aa)
	PEX2_108910	GST N-terminal domain-containing protein. (460 aa)
	PEX2_089200	Protein kinase domain-containing protein. (830 aa)
	PEX2_090700	Helicase, C-terminal. (1163 aa)
	PEX2_071370	Protein kinase domain-containing protein. (430 aa)
	PEX2_057000	Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2. (608 aa)
	PEX2_082390	Tetratricopeptide-like helical. (585 aa)
	PEX2_048720	Tetratricopeptide-like helical. (568 aa)
	PEX2_107530	Protein kinase domain-containing protein. (208 aa)
	PEX2_094380	Nucleotide-binding, alpha-beta plait. (756 aa)
	PEX2_085360	RNA-processing protein, HAT helix. (1266 aa)
	PEX2_103890	Hemopexin/matrixin. (219 aa)
	PEX2_104350	NmrA domain-containing protein. (292 aa)
	PEX2_092100	Protein kinase domain-containing protein. (450 aa)
	PEX2_105290	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (226 aa)
	PEX2_063520	Uncharacterized protein. (385 aa)
	PEX2_057550	K Homology domain, type 1. (485 aa)
	PEX2_079290	Protein kinase domain-containing protein. (359 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_003270	PEX2_033170	A0A0A2JQN9	A0A0A2JZY9	Splicing factor 3B subunit 1.	Uncharacterized protein.	0.845
PEX2_003270	PEX2_034010	A0A0A2JQN9	A0A0A2JY55	Splicing factor 3B subunit 1.	PSP domain-containing protein.	0.999
PEX2_003270	PEX2_036690	A0A0A2JQN9	A0A0A2IFV9	Splicing factor 3B subunit 1.	WD_REPEATS_REGION domain-containing protein.	0.949
PEX2_003270	PEX2_042130	A0A0A2JQN9	A0A0A2KRD9	Splicing factor 3B subunit 1.	Uncharacterized protein.	0.998
PEX2_003270	PEX2_057000	A0A0A2JQN9	A0A0A2JCA9	Splicing factor 3B subunit 1.	Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2.	0.808
PEX2_003270	PEX2_072680	A0A0A2JQN9	A0A0A2JXE9	Splicing factor 3B subunit 1.	Nucleotide-binding, alpha-beta plait.	0.988
PEX2_003270	PEX2_081030	A0A0A2JQN9	A0A0A2IBN6	Splicing factor 3B subunit 1.	RNA recognition motif domain, eukaryote.	0.995
PEX2_003270	PEX2_090700	A0A0A2JQN9	A0A0A2JHD1	Splicing factor 3B subunit 1.	Helicase, C-terminal.	0.996
PEX2_003270	PEX2_092630	A0A0A2JQN9	A0A0A2IL91	Splicing factor 3B subunit 1.	LUC7-like protein.	0.926
PEX2_003270	PEX2_094380	A0A0A2JQN9	A0A0A2J6E5	Splicing factor 3B subunit 1.	Nucleotide-binding, alpha-beta plait.	0.900
PEX2_003270	PEX2_099160	A0A0A2JQN9	A0A0A2I2M2	Splicing factor 3B subunit 1.	RNA-processing protein, HAT helix.	0.923
PEX2_003270	PEX2_101420	A0A0A2JQN9	A0A0A2K0X5	Splicing factor 3B subunit 1.	RNA-processing protein, HAT helix.	0.986
PEX2_003270	PEX2_103640	A0A0A2JQN9	A0A0A2JV65	Splicing factor 3B subunit 1.	Zinc finger, U1-type.	0.996
PEX2_003270	PEX2_105290	A0A0A2JQN9	A0A0A2J0M7	Splicing factor 3B subunit 1.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.985
PEX2_003270	PEX2_106550	A0A0A2JQN9	A0A0A2JMB7	Splicing factor 3B subunit 1.	JAB_MPN domain-containing protein.	0.984
PEX2_005880	PEX2_081030	A0A0A2I8F6	A0A0A2IBN6	Tetratricopeptide-like helical.	RNA recognition motif domain, eukaryote.	0.455
PEX2_005970	PEX2_081030	A0A0A2JUH7	A0A0A2IBN6	Protein kinase domain-containing protein.	RNA recognition motif domain, eukaryote.	0.455
PEX2_023410	PEX2_081030	A0A0A2L0X4	A0A0A2IBN6	Tetratricopeptide-like helical.	RNA recognition motif domain, eukaryote.	0.455
PEX2_029950	PEX2_081030	A0A0A2I8C1	A0A0A2IBN6	Protein kinase domain-containing protein.	RNA recognition motif domain, eukaryote.	0.655
PEX2_033170	PEX2_003270	A0A0A2JZY9	A0A0A2JQN9	Uncharacterized protein.	Splicing factor 3B subunit 1.	0.845