12 items (Penicillium expansum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PEX2_082500	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1249 aa)
	PEX2_044590	Uncharacterized protein. (567 aa)
	PEX2_088750	DNA-directed RNA polymerase, subunit N/Rpb10. (74 aa)
	PEX2_012190	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1671 aa)
	PEX2_012650	DNA-directed RNA polymerase, RPB5 subunit. (234 aa)
	PEX2_088740	Uncharacterized protein. (640 aa)
	PEX2_103510	RNA polymerase archaeal subunit P/eukaryotic subunit RPC10. (78 aa)
	PEX2_026120	RNA_pol_L_2 domain-containing protein. (138 aa)
	PEX2_003180	DNA-directed RNA polymerase, dimerization. (374 aa)
	PEX2_088170	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	PEX2_023870	RNA polymerase Rpb7, N-terminal. (385 aa)
	PEX2_110520	RNA polymerase, subunit omega/K/RPABC2. (153 aa)

Your Current Organism:

Penicillium expansum

NCBI taxonomy Id: 27334
Other names: ATCC 7861, CBS 325.48, P. expansum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PEX2_003180	PEX2_012190	A0A0A2K998	A0A0A2I945	DNA-directed RNA polymerase, dimerization.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
PEX2_003180	PEX2_012650	A0A0A2K998	A0A0A2I7F3	DNA-directed RNA polymerase, dimerization.	DNA-directed RNA polymerase, RPB5 subunit.	0.999
PEX2_003180	PEX2_023870	A0A0A2K998	A0A0A2JNP3	DNA-directed RNA polymerase, dimerization.	RNA polymerase Rpb7, N-terminal.	0.999
PEX2_003180	PEX2_026120	A0A0A2K998	A0A0A2KHB2	DNA-directed RNA polymerase, dimerization.	RNA_pol_L_2 domain-containing protein.	0.999
PEX2_003180	PEX2_044590	A0A0A2K998	A0A0A2IXZ5	DNA-directed RNA polymerase, dimerization.	Uncharacterized protein.	0.999
PEX2_003180	PEX2_082500	A0A0A2K998	A0A0A2JC28	DNA-directed RNA polymerase, dimerization.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
PEX2_003180	PEX2_088170	A0A0A2K998	A0A0A2K8D7	DNA-directed RNA polymerase, dimerization.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
PEX2_003180	PEX2_088740	A0A0A2K998	A0A0A2I2H4	DNA-directed RNA polymerase, dimerization.	Uncharacterized protein.	0.991
PEX2_003180	PEX2_088750	A0A0A2K998	A0A0A2IHT3	DNA-directed RNA polymerase, dimerization.	DNA-directed RNA polymerase, subunit N/Rpb10.	0.997
PEX2_003180	PEX2_103510	A0A0A2K998	A0A0A2KXR6	DNA-directed RNA polymerase, dimerization.	RNA polymerase archaeal subunit P/eukaryotic subunit RPC10.	0.999
PEX2_003180	PEX2_110520	A0A0A2K998	A0A0A2JJD5	DNA-directed RNA polymerase, dimerization.	RNA polymerase, subunit omega/K/RPABC2.	0.999
PEX2_012190	PEX2_003180	A0A0A2I945	A0A0A2K998	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, dimerization.	0.999
PEX2_012190	PEX2_012650	A0A0A2I945	A0A0A2I7F3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, RPB5 subunit.	0.999
PEX2_012190	PEX2_023870	A0A0A2I945	A0A0A2JNP3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase Rpb7, N-terminal.	0.999
PEX2_012190	PEX2_026120	A0A0A2I945	A0A0A2KHB2	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA_pol_L_2 domain-containing protein.	0.998
PEX2_012190	PEX2_044590	A0A0A2I945	A0A0A2IXZ5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.999
PEX2_012190	PEX2_082500	A0A0A2I945	A0A0A2JC28	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
PEX2_012190	PEX2_088170	A0A0A2I945	A0A0A2K8D7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
PEX2_012190	PEX2_088740	A0A0A2I945	A0A0A2I2H4	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.976
PEX2_012190	PEX2_088750	A0A0A2I945	A0A0A2IHT3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, subunit N/Rpb10.	0.995